Gene : Glyma.20G217000 G. max Wm82.a2.v1
Defline:  (1 of 18) KOG3399 - Predicted Yippee-type zinc-binding protein Genomic Order:  2170
Name:  ? Glyma.20G217000 Secondary Identifier:  ? PAC:30521790
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G217000 0.5kb upstream 0.5kb upstream 2868 true Chr20: 45275164-45278031 Glycine max
Glyma.20G217000 0.5kb upstream 0.5kb upstream 500 false Chr20: 45277532-45278031 Glycine max
Glyma.20G217000 0.5kb downstream 0.5kb downstream 2868 true Chr20: 45274664-45277531 Glycine max
Glyma.20G217000 0.5kb downstream 0.5kb downstream 500 false Chr20: 45274664-45275163 Glycine max
Glyma.20G217000 1.0kb upstream 1.0kb upstream 3368 true Chr20: 45275164-45278531 Glycine max
Glyma.20G217000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 45277532-45278531 Glycine max
Glyma.20G217000 1.0kb downstream 1.0kb downstream 3368 true Chr20: 45274164-45277531 Glycine max
Glyma.20G217000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 45274164-45275163 Glycine max
Glyma.20G217000 2.0kb upstream 2.0kb upstream 4368 true Chr20: 45275164-45279531 Glycine max
Glyma.20G217000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 45277532-45279531 Glycine max
Glyma.20G217000 2.0kb downstream 2.0kb downstream 4368 true Chr20: 45273164-45277531 Glycine max
Glyma.20G217000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 45273164-45275163 Glycine max
Glyma.20G217000 5.0kb upstream 5.0kb upstream 7368 true Chr20: 45275164-45282531 Glycine max
Glyma.20G217000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 45277532-45282531 Glycine max
Glyma.20G217000 5.0kb downstream 5.0kb downstream 7368 true Chr20: 45270164-45277531 Glycine max
Glyma.20G217000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 45270164-45275163 Glycine max
Glyma.20G217000 10.0kb upstream 10.0kb upstream 12368 true Chr20: 45275164-45287531 Glycine max
Glyma.20G217000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 45277532-45287531 Glycine max
Glyma.20G217000 10.0kb downstream 10.0kb downstream 12368 true Chr20: 45265164-45277531 Glycine max
Glyma.20G217000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 45265164-45275163 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041337 5273 Angiosperm View MSA
122254387 5265 Fabidae View MSA
124072414 5270 Rosid View MSA
123752615 5271 Pentapetalae View MSA
122791285 5272 Eudicot View MSA
123428914 5275 Viridiplantae View MSA
121343957 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.27264 0.0 11.3861    
cufflinks 2.62938 0.0 9.32265    
cufflinks 2.10326 0.0 7.54341    
cufflinks 4.98514 0.0 16.5123    
cufflinks 4.95817 0.0 16.4769    
cufflinks 5.14942 0.0 17.0213    
cufflinks 0.70477 0.0 2.68568   Low
cufflinks 10.4642 0.0 31.333   High
cufflinks 5.48387 0.0 17.9873    
cufflinks 5.504       High
cufflinks 0.137       Low
cufflinks 1.236        
cufflinks 1.882       High
cufflinks 2.808       High
cufflinks 0.173       Low
cufflinks 0.366        
cufflinks 0.73        
cufflinks 2.538       High
cufflinks 0.887        
cufflinks 0.29        
cufflinks 0.39        
cufflinks 0.549        
cufflinks 0.439        
cufflinks 0.191       Low
cufflinks 0.513        
cufflinks 0.447        

0 Strain