Gene : Glyma.20G217700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14571:SF9 - PHD FINGER PROTEIN 13 Genomic Order:  2177
Name:  ? Glyma.20G217700 Secondary Identifier:  ? PAC:30522316
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G217700 0.5kb upstream 0.5kb upstream 11054 true Chr20: 45347424-45358477 Glycine max
Glyma.20G217700 0.5kb upstream 0.5kb upstream 500 false Chr20: 45357978-45358477 Glycine max
Glyma.20G217700 0.5kb downstream 0.5kb downstream 11054 true Chr20: 45346924-45357977 Glycine max
Glyma.20G217700 0.5kb downstream 0.5kb downstream 500 false Chr20: 45346924-45347423 Glycine max
Glyma.20G217700 1.0kb upstream 1.0kb upstream 11554 true Chr20: 45347424-45358977 Glycine max
Glyma.20G217700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 45357978-45358977 Glycine max
Glyma.20G217700 1.0kb downstream 1.0kb downstream 11554 true Chr20: 45346424-45357977 Glycine max
Glyma.20G217700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 45346424-45347423 Glycine max
Glyma.20G217700 2.0kb upstream 2.0kb upstream 12554 true Chr20: 45347424-45359977 Glycine max
Glyma.20G217700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 45357978-45359977 Glycine max
Glyma.20G217700 2.0kb downstream 2.0kb downstream 12554 true Chr20: 45345424-45357977 Glycine max
Glyma.20G217700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 45345424-45347423 Glycine max
Glyma.20G217700 5.0kb upstream 5.0kb upstream 15554 true Chr20: 45347424-45362977 Glycine max
Glyma.20G217700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 45357978-45362977 Glycine max
Glyma.20G217700 5.0kb downstream 5.0kb downstream 15554 true Chr20: 45342424-45357977 Glycine max
Glyma.20G217700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 45342424-45347423 Glycine max
Glyma.20G217700 10.0kb upstream 10.0kb upstream 20554 true Chr20: 45347424-45367977 Glycine max
Glyma.20G217700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 45357978-45367977 Glycine max
Glyma.20G217700 10.0kb downstream 10.0kb downstream 20554 true Chr20: 45337424-45357977 Glycine max
Glyma.20G217700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 45337424-45347423 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302365 5265 Fabidae View MSA
124061869 5270 Rosid View MSA
123737201 5271 Pentapetalae View MSA
122791412 5272 Eudicot View MSA
122046243 5273 Angiosperm View MSA
121350322 5274 Embryophyte View MSA
123426833 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.34739 0.0 24.2255    
cufflinks 4.97896 0.0 22.89    
cufflinks 6.87832 0.0 34.4503   High
cufflinks 5.2049 0.0 27.1511    
cufflinks 3.55354 0.0 16.3619    
cufflinks 2.48881 0.0 11.6604   Low
cufflinks 7.86022 0.0 36.7583   High
cufflinks 3.59044 0.0 17.4278    
cufflinks 3.92946 0.0 18.3398    
cufflinks 0.347       Low
cufflinks 0.879        
cufflinks 0.715        
cufflinks 0.332       Low
cufflinks 0.329       Low
cufflinks 1.018       High
cufflinks 0.88        
cufflinks 0.479        
cufflinks 0.665        
cufflinks 0.883        
cufflinks 0.997        
cufflinks 0.812        
cufflinks 0.964        
cufflinks 0.646        
cufflinks 0.83        
cufflinks 0.938        
cufflinks 0.703        

0 Strain