Gene : Glyma.20G218400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10694//PTHR10694:SF53 - JUMONJI DOMAIN CONTAINING PROTEIN Genomic Order:  2184
Name:  ? Glyma.20G218400 Secondary Identifier:  ? PAC:30521766
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G218400 0.5kb upstream 0.5kb upstream 11728 true Chr20: 45404428-45416155 Glycine max
Glyma.20G218400 0.5kb upstream 0.5kb upstream 500 false Chr20: 45415656-45416155 Glycine max
Glyma.20G218400 0.5kb downstream 0.5kb downstream 11728 true Chr20: 45403928-45415655 Glycine max
Glyma.20G218400 0.5kb downstream 0.5kb downstream 500 false Chr20: 45403928-45404427 Glycine max
Glyma.20G218400 1.0kb upstream 1.0kb upstream 12228 true Chr20: 45404428-45416655 Glycine max
Glyma.20G218400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 45415656-45416655 Glycine max
Glyma.20G218400 1.0kb downstream 1.0kb downstream 12228 true Chr20: 45403428-45415655 Glycine max
Glyma.20G218400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 45403428-45404427 Glycine max
Glyma.20G218400 2.0kb upstream 2.0kb upstream 13228 true Chr20: 45404428-45417655 Glycine max
Glyma.20G218400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 45415656-45417655 Glycine max
Glyma.20G218400 2.0kb downstream 2.0kb downstream 13228 true Chr20: 45402428-45415655 Glycine max
Glyma.20G218400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 45402428-45404427 Glycine max
Glyma.20G218400 5.0kb upstream 5.0kb upstream 16228 true Chr20: 45404428-45420655 Glycine max
Glyma.20G218400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 45415656-45420655 Glycine max
Glyma.20G218400 5.0kb downstream 5.0kb downstream 16228 true Chr20: 45399428-45415655 Glycine max
Glyma.20G218400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 45399428-45404427 Glycine max
Glyma.20G218400 10.0kb upstream 10.0kb upstream 21228 true Chr20: 45404428-45425655 Glycine max
Glyma.20G218400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 45415656-45425655 Glycine max
Glyma.20G218400 10.0kb downstream 10.0kb downstream 21228 true Chr20: 45394428-45415655 Glycine max
Glyma.20G218400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 45394428-45404427 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303423 5265 Fabidae View MSA
124068572 5270 Rosid View MSA
123751211 5271 Pentapetalae View MSA
122797514 5272 Eudicot View MSA
122050637 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121350129 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.7672 0.0 18.6634    
cufflinks 3.54034 0.0 12.7671    
cufflinks 4.90292 0.0 20.0917   High
cufflinks 4.10609 0.0 14.4586    
cufflinks 2.91218 0.0 10.8701   Low
cufflinks 5.19578 0.0 17.8352   High
cufflinks 4.35106 0.0 23.1394    
cufflinks 2.79832 0.0 10.5041   Low
cufflinks 3.47762 0.0 12.5777    
cufflinks 0.298       Low
cufflinks 0.502        
cufflinks 0.587       High
cufflinks 0.395        
cufflinks 0.333       Low
cufflinks 0.473        
cufflinks 0.339       Low
cufflinks 0.401        
cufflinks 0.547       High
cufflinks 0.46        
cufflinks 0.386        
cufflinks 0.307       Low
cufflinks 0.419        
cufflinks 0.447        
cufflinks 0.573       High
cufflinks 0.356        
cufflinks 0.502        

0 Strain