Gene : Glyma.20G218800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15608 - SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2 Genomic Order:  2188
Name:  ? Glyma.20G218800 Secondary Identifier:  ? PAC:30520646
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G218800 0.5kb upstream 0.5kb upstream 9879 true Chr20: 45454390-45464268 Glycine max
Glyma.20G218800 0.5kb upstream 0.5kb upstream 500 false Chr20: 45463769-45464268 Glycine max
Glyma.20G218800 0.5kb downstream 0.5kb downstream 9879 true Chr20: 45453890-45463768 Glycine max
Glyma.20G218800 0.5kb downstream 0.5kb downstream 500 false Chr20: 45453890-45454389 Glycine max
Glyma.20G218800 1.0kb upstream 1.0kb upstream 10379 true Chr20: 45454390-45464768 Glycine max
Glyma.20G218800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 45463769-45464768 Glycine max
Glyma.20G218800 1.0kb downstream 1.0kb downstream 10379 true Chr20: 45453390-45463768 Glycine max
Glyma.20G218800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 45453390-45454389 Glycine max
Glyma.20G218800 2.0kb upstream 2.0kb upstream 11379 true Chr20: 45454390-45465768 Glycine max
Glyma.20G218800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 45463769-45465768 Glycine max
Glyma.20G218800 2.0kb downstream 2.0kb downstream 11379 true Chr20: 45452390-45463768 Glycine max
Glyma.20G218800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 45452390-45454389 Glycine max
Glyma.20G218800 5.0kb upstream 5.0kb upstream 14379 true Chr20: 45454390-45468768 Glycine max
Glyma.20G218800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 45463769-45468768 Glycine max
Glyma.20G218800 5.0kb downstream 5.0kb downstream 14379 true Chr20: 45449390-45463768 Glycine max
Glyma.20G218800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 45449390-45454389 Glycine max
Glyma.20G218800 10.0kb upstream 10.0kb upstream 19379 true Chr20: 45454390-45473768 Glycine max
Glyma.20G218800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 45463769-45473768 Glycine max
Glyma.20G218800 10.0kb downstream 10.0kb downstream 19379 true Chr20: 45444390-45463768 Glycine max
Glyma.20G218800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 45444390-45454389 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299213 5265 Fabidae View MSA
124064706 5270 Rosid View MSA
123741272 5271 Pentapetalae View MSA
122787667 5272 Eudicot View MSA
122045065 5273 Angiosperm View MSA
121347459 5274 Embryophyte View MSA
123427935 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.90328 0.0 24.645    
cufflinks 11.4829 0.0 39.1763   High
cufflinks 7.66051 0.0 26.8908    
cufflinks 9.75253 0.0 33.494    
cufflinks 6.40592 0.0 23.1878    
cufflinks 4.45891 0.0 17.3648   Low
cufflinks 13.3444 0.0 45.3691   High
cufflinks 6.85682 0.0 24.5211    
cufflinks 8.19509 0.0 28.6427    
cufflinks 0.716        
cufflinks 0.576       Low
cufflinks 1.702       High
cufflinks 0.927        
cufflinks 0.945        
cufflinks 0.954        
cufflinks 1.038        
cufflinks 0.613       Low
cufflinks 1.913       High
cufflinks 1.67       High
cufflinks 0.913        
cufflinks 0.52       Low
cufflinks 1.097        
cufflinks 1.177        
cufflinks 0.592       Low
cufflinks 1.016        
cufflinks 0.589       Low

0 Strain