Gene : Glyma.20G219100 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12506//PTHR12506:SF21 - PROTEIN PHOSPHATASE RELATED Genomic Order:  2191
Name:  ? Glyma.20G219100 Secondary Identifier:  ? PAC:30521958
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G219100 0.5kb upstream 0.5kb upstream 6096 true Chr20: 45489919-45496014 Glycine max
Glyma.20G219100 0.5kb upstream 0.5kb upstream 500 false Chr20: 45489919-45490418 Glycine max
Glyma.20G219100 0.5kb downstream 0.5kb downstream 6096 true Chr20: 45490419-45496514 Glycine max
Glyma.20G219100 0.5kb downstream 0.5kb downstream 500 false Chr20: 45496015-45496514 Glycine max
Glyma.20G219100 1.0kb upstream 1.0kb upstream 6596 true Chr20: 45489419-45496014 Glycine max
Glyma.20G219100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 45489419-45490418 Glycine max
Glyma.20G219100 1.0kb downstream 1.0kb downstream 6596 true Chr20: 45490419-45497014 Glycine max
Glyma.20G219100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 45496015-45497014 Glycine max
Glyma.20G219100 2.0kb upstream 2.0kb upstream 7596 true Chr20: 45488419-45496014 Glycine max
Glyma.20G219100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 45488419-45490418 Glycine max
Glyma.20G219100 2.0kb downstream 2.0kb downstream 7596 true Chr20: 45490419-45498014 Glycine max
Glyma.20G219100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 45496015-45498014 Glycine max
Glyma.20G219100 5.0kb upstream 5.0kb upstream 10596 true Chr20: 45485419-45496014 Glycine max
Glyma.20G219100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 45485419-45490418 Glycine max
Glyma.20G219100 5.0kb downstream 5.0kb downstream 10596 true Chr20: 45490419-45501014 Glycine max
Glyma.20G219100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 45496015-45501014 Glycine max
Glyma.20G219100 10.0kb upstream 10.0kb upstream 15596 true Chr20: 45480419-45496014 Glycine max
Glyma.20G219100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 45480419-45490418 Glycine max
Glyma.20G219100 10.0kb downstream 10.0kb downstream 15596 true Chr20: 45490419-45506014 Glycine max
Glyma.20G219100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 45496015-45506014 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253907 5265 Fabidae View MSA
123996302 5270 Rosid View MSA
123742436 5271 Pentapetalae View MSA
122788272 5272 Eudicot View MSA
122047416 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.30707 0.0 22.0762   High
cufflinks 3.89641 0.0 13.0996    
cufflinks 5.70232 0.0 17.7065    
cufflinks 7.67378 0.0 26.5091   High
cufflinks 4.11874 0.0 13.6565    
cufflinks 2.89535 0.0 10.4989   Low
cufflinks 5.37259 0.0 19.5655    
cufflinks 4.34263 0.0 14.2032    
cufflinks 5.42896 0.0 19.7159    
cufflinks 1.455        
cufflinks 0.502       Low
cufflinks 1.883        
cufflinks 1.142        
cufflinks 1.028        
cufflinks 1.296        
cufflinks 1.656        
cufflinks 0.706       Low
cufflinks 2.791       High
cufflinks 1.984        
cufflinks 1.761        
cufflinks 0.567       Low
cufflinks 2.17        
cufflinks 2.417       High
cufflinks 0.72       Low
cufflinks 1.783        
cufflinks 0.561       Low

0 Strain