Gene : Glyma.20G219500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10589//PTHR10589:SF30 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE Genomic Order:  2195
Name:  ? Glyma.20G219500 Secondary Identifier:  ? PAC:30521011
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G219500 0.5kb upstream 0.5kb upstream 4368 true Chr20: 45509069-45513436 Glycine max
Glyma.20G219500 0.5kb upstream 0.5kb upstream 500 false Chr20: 45509069-45509568 Glycine max
Glyma.20G219500 0.5kb downstream 0.5kb downstream 4368 true Chr20: 45509569-45513936 Glycine max
Glyma.20G219500 0.5kb downstream 0.5kb downstream 500 false Chr20: 45513437-45513936 Glycine max
Glyma.20G219500 1.0kb upstream 1.0kb upstream 4868 true Chr20: 45508569-45513436 Glycine max
Glyma.20G219500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 45508569-45509568 Glycine max
Glyma.20G219500 1.0kb downstream 1.0kb downstream 4868 true Chr20: 45509569-45514436 Glycine max
Glyma.20G219500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 45513437-45514436 Glycine max
Glyma.20G219500 2.0kb upstream 2.0kb upstream 5868 true Chr20: 45507569-45513436 Glycine max
Glyma.20G219500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 45507569-45509568 Glycine max
Glyma.20G219500 2.0kb downstream 2.0kb downstream 5868 true Chr20: 45509569-45515436 Glycine max
Glyma.20G219500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 45513437-45515436 Glycine max
Glyma.20G219500 5.0kb upstream 5.0kb upstream 8868 true Chr20: 45504569-45513436 Glycine max
Glyma.20G219500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 45504569-45509568 Glycine max
Glyma.20G219500 5.0kb downstream 5.0kb downstream 8868 true Chr20: 45509569-45518436 Glycine max
Glyma.20G219500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 45513437-45518436 Glycine max
Glyma.20G219500 10.0kb upstream 10.0kb upstream 13868 true Chr20: 45499569-45513436 Glycine max
Glyma.20G219500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 45499569-45509568 Glycine max
Glyma.20G219500 10.0kb downstream 10.0kb downstream 13868 true Chr20: 45509569-45523436 Glycine max
Glyma.20G219500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 45513437-45523436 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305215 5265 Fabidae View MSA
124068259 5270 Rosid View MSA
123738653 5271 Pentapetalae View MSA
122786762 5272 Eudicot View MSA
122047497 5273 Angiosperm View MSA
121350300 5274 Embryophyte View MSA
123424005 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.65854 0.0 25.3979    
cufflinks 5.55916 0.0 21.1038    
cufflinks 3.65727 0.0 15.6279   Low
cufflinks 6.76808 0.0 28.8585    
cufflinks 6.6728 0.0 22.8624    
cufflinks 6.24144 0.0 26.8168    
cufflinks 7.17398 0.0 28.9415    
cufflinks 5.99395 0.0 26.0734    
cufflinks 7.48981 0.0 30.8368   High
cufflinks 0.537        
cufflinks 0.313       Low
cufflinks 0.617        
cufflinks 1.23       High
cufflinks 1.307       High
cufflinks 0.572        
cufflinks 0.447        
cufflinks 0.628        
cufflinks 0.708        
cufflinks 0.649        
cufflinks 0.423        
cufflinks 0.311       Low
cufflinks 0.48        
cufflinks 0.673        
cufflinks 0.41        
cufflinks 0.388        
cufflinks 0.441        

0 Strain