Gene : Glyma.20G209500 G. max Wm82.a2.v1
Defline:  (1 of 67) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  2095
Name:  ? Glyma.20G209500 Secondary Identifier:  ? PAC:30519783
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G209500 0.5kb upstream 0.5kb upstream 1627 true Chr20: 44573080-44574706 Glycine max
Glyma.20G209500 0.5kb upstream 0.5kb upstream 500 false Chr20: 44573080-44573579 Glycine max
Glyma.20G209500 0.5kb downstream 0.5kb downstream 1627 true Chr20: 44573580-44575206 Glycine max
Glyma.20G209500 0.5kb downstream 0.5kb downstream 500 false Chr20: 44574707-44575206 Glycine max
Glyma.20G209500 1.0kb upstream 1.0kb upstream 2127 true Chr20: 44572580-44574706 Glycine max
Glyma.20G209500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 44572580-44573579 Glycine max
Glyma.20G209500 1.0kb downstream 1.0kb downstream 2127 true Chr20: 44573580-44575706 Glycine max
Glyma.20G209500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 44574707-44575706 Glycine max
Glyma.20G209500 2.0kb upstream 2.0kb upstream 3127 true Chr20: 44571580-44574706 Glycine max
Glyma.20G209500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 44571580-44573579 Glycine max
Glyma.20G209500 2.0kb downstream 2.0kb downstream 3127 true Chr20: 44573580-44576706 Glycine max
Glyma.20G209500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 44574707-44576706 Glycine max
Glyma.20G209500 5.0kb upstream 5.0kb upstream 6127 true Chr20: 44568580-44574706 Glycine max
Glyma.20G209500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 44568580-44573579 Glycine max
Glyma.20G209500 5.0kb downstream 5.0kb downstream 6127 true Chr20: 44573580-44579706 Glycine max
Glyma.20G209500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 44574707-44579706 Glycine max
Glyma.20G209500 10.0kb upstream 10.0kb upstream 11127 true Chr20: 44563580-44574706 Glycine max
Glyma.20G209500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 44563580-44573579 Glycine max
Glyma.20G209500 10.0kb downstream 10.0kb downstream 11127 true Chr20: 44573580-44584706 Glycine max
Glyma.20G209500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 44574707-44584706 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303616 5265 Fabidae View MSA
124069006 5270 Rosid View MSA
123747839 5271 Pentapetalae View MSA
122792637 5272 Eudicot View MSA
122050449 5273 Angiosperm View MSA
121311915 5274 Embryophyte View MSA
123349144 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.985819 0.0 3.6193    
cufflinks 0.40769 0.0 1.55891    
cufflinks 2.89149 0.0 9.67773    
cufflinks 0.442702 0.0 1.68626    
cufflinks 1.17103 0.0 4.25823    
cufflinks 0.20126 0.0 0.792983 Low  
cufflinks 0.0563886 0.0 0.235456 Low Low
cufflinks 11.3227 0.0 31.7188   High
cufflinks 1.56005 0.0 5.55703    
cufflinks 6.722       High
cufflinks 5.746     High High
cufflinks 1.297        
cufflinks 0.619        
cufflinks 0.194       Low
cufflinks 0.346       Low
cufflinks 0.391        
cufflinks 3.091        
cufflinks 0.735        
cufflinks 0.466        
cufflinks 0.553        
cufflinks 7.124     High High
cufflinks 0.615        
cufflinks 0.436        
cufflinks 4.526       High
cufflinks 0.645        
cufflinks 5.702       High

0 Strain