Gene : Glyma.20G209600 G. max Wm82.a2.v1
Defline:  (1 of 67) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  2096
Name:  ? Glyma.20G209600 Secondary Identifier:  ? PAC:30519923
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G209600 0.5kb upstream 0.5kb upstream 995 true Chr20: 44577788-44578782 Glycine max
Glyma.20G209600 0.5kb upstream 0.5kb upstream 500 false Chr20: 44577788-44578287 Glycine max
Glyma.20G209600 0.5kb downstream 0.5kb downstream 995 true Chr20: 44578288-44579282 Glycine max
Glyma.20G209600 0.5kb downstream 0.5kb downstream 500 false Chr20: 44578783-44579282 Glycine max
Glyma.20G209600 1.0kb upstream 1.0kb upstream 1495 true Chr20: 44577288-44578782 Glycine max
Glyma.20G209600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 44577288-44578287 Glycine max
Glyma.20G209600 1.0kb downstream 1.0kb downstream 1495 true Chr20: 44578288-44579782 Glycine max
Glyma.20G209600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 44578783-44579782 Glycine max
Glyma.20G209600 2.0kb upstream 2.0kb upstream 2495 true Chr20: 44576288-44578782 Glycine max
Glyma.20G209600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 44576288-44578287 Glycine max
Glyma.20G209600 2.0kb downstream 2.0kb downstream 2495 true Chr20: 44578288-44580782 Glycine max
Glyma.20G209600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 44578783-44580782 Glycine max
Glyma.20G209600 5.0kb upstream 5.0kb upstream 5495 true Chr20: 44573288-44578782 Glycine max
Glyma.20G209600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 44573288-44578287 Glycine max
Glyma.20G209600 5.0kb downstream 5.0kb downstream 5495 true Chr20: 44578288-44583782 Glycine max
Glyma.20G209600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 44578783-44583782 Glycine max
Glyma.20G209600 10.0kb upstream 10.0kb upstream 10495 true Chr20: 44568288-44578782 Glycine max
Glyma.20G209600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 44568288-44578287 Glycine max
Glyma.20G209600 10.0kb downstream 10.0kb downstream 10495 true Chr20: 44578288-44588782 Glycine max
Glyma.20G209600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 44578783-44588782 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303616 5265 Fabidae View MSA
124069006 5270 Rosid View MSA
123747839 5271 Pentapetalae View MSA
122792637 5272 Eudicot View MSA
122050449 5273 Angiosperm View MSA
121311915 5274 Embryophyte View MSA
123349144 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.406406 0.0 1.61794    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0573345 0.0 0.259324 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain