Gene : Glyma.20G209900 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR11455:SF24 - CRYPTOCHROME-1 Genomic Order:  2099
Name:  ? Glyma.20G209900 Secondary Identifier:  ? PAC:30522561
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G209900 0.5kb upstream 0.5kb upstream 6494 true Chr20: 44603229-44609722 Glycine max
Glyma.20G209900 0.5kb upstream 0.5kb upstream 500 false Chr20: 44603229-44603728 Glycine max
Glyma.20G209900 0.5kb downstream 0.5kb downstream 6494 true Chr20: 44603729-44610222 Glycine max
Glyma.20G209900 0.5kb downstream 0.5kb downstream 500 false Chr20: 44609723-44610222 Glycine max
Glyma.20G209900 1.0kb upstream 1.0kb upstream 6994 true Chr20: 44602729-44609722 Glycine max
Glyma.20G209900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 44602729-44603728 Glycine max
Glyma.20G209900 1.0kb downstream 1.0kb downstream 6994 true Chr20: 44603729-44610722 Glycine max
Glyma.20G209900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 44609723-44610722 Glycine max
Glyma.20G209900 2.0kb upstream 2.0kb upstream 7994 true Chr20: 44601729-44609722 Glycine max
Glyma.20G209900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 44601729-44603728 Glycine max
Glyma.20G209900 2.0kb downstream 2.0kb downstream 7994 true Chr20: 44603729-44611722 Glycine max
Glyma.20G209900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 44609723-44611722 Glycine max
Glyma.20G209900 5.0kb upstream 5.0kb upstream 10994 true Chr20: 44598729-44609722 Glycine max
Glyma.20G209900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 44598729-44603728 Glycine max
Glyma.20G209900 5.0kb downstream 5.0kb downstream 10994 true Chr20: 44603729-44614722 Glycine max
Glyma.20G209900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 44609723-44614722 Glycine max
Glyma.20G209900 10.0kb upstream 10.0kb upstream 15994 true Chr20: 44593729-44609722 Glycine max
Glyma.20G209900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 44593729-44603728 Glycine max
Glyma.20G209900 10.0kb downstream 10.0kb downstream 15994 true Chr20: 44603729-44619722 Glycine max
Glyma.20G209900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 44609723-44619722 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306524 5265 Fabidae View MSA
124066295 5270 Rosid View MSA
123738147 5271 Pentapetalae View MSA
122792892 5272 Eudicot View MSA
122048329 5273 Angiosperm View MSA
121343845 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 50.1998 0.0 166.546 High  
cufflinks 28.0472 0.0 98.0115 High  
cufflinks 60.9555 0.0 222.233 High  
cufflinks 51.6431 0.0 173.746 High  
cufflinks 24.4548 0.0 82.5584 High  
cufflinks 12.3091 0.0 37.2075   Low
cufflinks 28.8313 0.0 100.954 High  
cufflinks 76.5888 0.0 302.518 High High
cufflinks 40.2567 0.0 122.537 High  
cufflinks 32.238     High  
cufflinks 50.883     High  
cufflinks 41.485     High  
cufflinks 15.774     High Low
cufflinks 11.55     High Low
cufflinks 40.289     High  
cufflinks 40.936     High  
cufflinks 17.122     High Low
cufflinks 33.997     High  
cufflinks 21.357     High  
cufflinks 57.133     High High
cufflinks 48.931     High  
cufflinks 50.945     High  
cufflinks 24.623     High  
cufflinks 38.987     High  
cufflinks 51.237     High  
cufflinks 27.395     High  

0 Strain