Gene : Glyma.20G210400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31734:SF30 - AUXIN-RESPONSIVE PROTEIN IAA14-RELATED Genomic Order:  2104
Name:  ? Glyma.20G210400 Secondary Identifier:  ? PAC:30522083
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G210400 0.5kb upstream 0.5kb upstream 3213 true Chr20: 44642090-44645302 Glycine max
Glyma.20G210400 0.5kb upstream 0.5kb upstream 500 false Chr20: 44644803-44645302 Glycine max
Glyma.20G210400 0.5kb downstream 0.5kb downstream 3213 true Chr20: 44641590-44644802 Glycine max
Glyma.20G210400 0.5kb downstream 0.5kb downstream 500 false Chr20: 44641590-44642089 Glycine max
Glyma.20G210400 1.0kb upstream 1.0kb upstream 3713 true Chr20: 44642090-44645802 Glycine max
Glyma.20G210400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 44644803-44645802 Glycine max
Glyma.20G210400 1.0kb downstream 1.0kb downstream 3713 true Chr20: 44641090-44644802 Glycine max
Glyma.20G210400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 44641090-44642089 Glycine max
Glyma.20G210400 2.0kb upstream 2.0kb upstream 4713 true Chr20: 44642090-44646802 Glycine max
Glyma.20G210400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 44644803-44646802 Glycine max
Glyma.20G210400 2.0kb downstream 2.0kb downstream 4713 true Chr20: 44640090-44644802 Glycine max
Glyma.20G210400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 44640090-44642089 Glycine max
Glyma.20G210400 5.0kb upstream 5.0kb upstream 7713 true Chr20: 44642090-44649802 Glycine max
Glyma.20G210400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 44644803-44649802 Glycine max
Glyma.20G210400 5.0kb downstream 5.0kb downstream 7713 true Chr20: 44637090-44644802 Glycine max
Glyma.20G210400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 44637090-44642089 Glycine max
Glyma.20G210400 10.0kb upstream 10.0kb upstream 12713 true Chr20: 44642090-44654802 Glycine max
Glyma.20G210400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 44644803-44654802 Glycine max
Glyma.20G210400 10.0kb downstream 10.0kb downstream 12713 true Chr20: 44632090-44644802 Glycine max
Glyma.20G210400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 44632090-44642089 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305422 5265 Fabidae View MSA
124071523 5270 Rosid View MSA
123744630 5271 Pentapetalae View MSA
122796049 5272 Eudicot View MSA
122042007 5273 Angiosperm View MSA
121309912 5274 Embryophyte View MSA
123347544 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.4317 0.0 95.9261 High  
cufflinks 5.26963 0.0 15.4832    
cufflinks 105.379 0.0 324.386 High  
cufflinks 0.716231 0.0 2.61416   Low
cufflinks 110.601 0.0 343.928 High  
cufflinks 116.897 0.0 366.245 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 54.2738 0.0 152.238 High  
cufflinks 31.7428 0.0 85.4589 High  
cufflinks 79.447     High  
cufflinks 11.93     High  
cufflinks 32.183     High  
cufflinks 111.514     High High
cufflinks 81.279     High  
cufflinks 0.182       Low
cufflinks 42.52     High  
cufflinks 9.264     High  
cufflinks 7.745     High  
cufflinks 0.925       Low
cufflinks 48.4     High  
cufflinks 14.549     High  
cufflinks 41.137     High  
cufflinks 14.136     High  
cufflinks 7.228     High  
cufflinks 59.374     High  
cufflinks 19.803     High  

0 Strain