Gene : Glyma.20G213300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10584:SF169 - FRUCTOKINASE-5-RELATED Genomic Order:  2133
Name:  ? Glyma.20G213300 Secondary Identifier:  ? PAC:30520494
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3801 Glycine max pathologic  
Gmax PWY-4101 Glycine max pathologic  
Gmax PWY-621 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G213300 0.5kb upstream 0.5kb upstream 2640 true Chr20: 44978111-44980750 Glycine max
Glyma.20G213300 0.5kb upstream 0.5kb upstream 500 false Chr20: 44978111-44978610 Glycine max
Glyma.20G213300 0.5kb downstream 0.5kb downstream 2640 true Chr20: 44978611-44981250 Glycine max
Glyma.20G213300 0.5kb downstream 0.5kb downstream 500 false Chr20: 44980751-44981250 Glycine max
Glyma.20G213300 1.0kb upstream 1.0kb upstream 3140 true Chr20: 44977611-44980750 Glycine max
Glyma.20G213300 1.0kb upstream 1.0kb upstream 1000 false Chr20: 44977611-44978610 Glycine max
Glyma.20G213300 1.0kb downstream 1.0kb downstream 3140 true Chr20: 44978611-44981750 Glycine max
Glyma.20G213300 1.0kb downstream 1.0kb downstream 1000 false Chr20: 44980751-44981750 Glycine max
Glyma.20G213300 2.0kb upstream 2.0kb upstream 4140 true Chr20: 44976611-44980750 Glycine max
Glyma.20G213300 2.0kb upstream 2.0kb upstream 2000 false Chr20: 44976611-44978610 Glycine max
Glyma.20G213300 2.0kb downstream 2.0kb downstream 4140 true Chr20: 44978611-44982750 Glycine max
Glyma.20G213300 2.0kb downstream 2.0kb downstream 2000 false Chr20: 44980751-44982750 Glycine max
Glyma.20G213300 5.0kb upstream 5.0kb upstream 7140 true Chr20: 44973611-44980750 Glycine max
Glyma.20G213300 5.0kb upstream 5.0kb upstream 5000 false Chr20: 44973611-44978610 Glycine max
Glyma.20G213300 5.0kb downstream 5.0kb downstream 7140 true Chr20: 44978611-44985750 Glycine max
Glyma.20G213300 5.0kb downstream 5.0kb downstream 5000 false Chr20: 44980751-44985750 Glycine max
Glyma.20G213300 10.0kb upstream 10.0kb upstream 12140 true Chr20: 44968611-44980750 Glycine max
Glyma.20G213300 10.0kb upstream 10.0kb upstream 10000 false Chr20: 44968611-44978610 Glycine max
Glyma.20G213300 10.0kb downstream 10.0kb downstream 12140 true Chr20: 44978611-44990750 Glycine max
Glyma.20G213300 10.0kb downstream 10.0kb downstream 10000 false Chr20: 44980751-44990750 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307288 5265 Fabidae View MSA
124067089 5270 Rosid View MSA
123741364 5271 Pentapetalae View MSA
122789669 5272 Eudicot View MSA
122050267 5273 Angiosperm View MSA
121350713 5274 Embryophyte View MSA
123424695 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.565628 0.0 2.10916    
cufflinks 0.276796 0.0 1.06601    
cufflinks 1.00913 0.0 3.63361   High
cufflinks 0.438773 0.0 1.65461    
cufflinks 0.155847 0.0 0.61401 Low  
cufflinks 0.124294 0.0 0.493635 Low  
cufflinks 0.33184 0.0 1.2669    
cufflinks 0.291146 0.0 1.11739    
cufflinks 0.0659791 0.0 0.268801 Low Low
cufflinks 0.385        
cufflinks 0.018     Low Low
cufflinks 1.128        
cufflinks 0.136        
cufflinks 0.065     Low  
cufflinks 0.09        
cufflinks 0.761        
cufflinks 0.015     Low Low
cufflinks 3.686       High
cufflinks 0.442        
cufflinks 1.274       High
cufflinks 0.036     Low  
cufflinks 1.106        
cufflinks 0.623        
cufflinks 0.009     Low Low
cufflinks 1.047        
cufflinks 0.037     Low  

0 Strain