Gene : Glyma.20G240000 G. max Wm82.a2.v1
Defline:  (1 of 7) 3.2.1.52 - Beta-N-acetylhexosaminidase / N-acetyl-beta-glucosaminidase Genomic Order:  2400
Name:  ? Glyma.20G240000 Secondary Identifier:  ? PAC:30522149
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6902 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G240000 0.5kb upstream 0.5kb upstream 6825 true Chr20: 47137688-47144512 Glycine max
Glyma.20G240000 0.5kb upstream 0.5kb upstream 500 false Chr20: 47144013-47144512 Glycine max
Glyma.20G240000 0.5kb downstream 0.5kb downstream 6825 true Chr20: 47137188-47144012 Glycine max
Glyma.20G240000 0.5kb downstream 0.5kb downstream 500 false Chr20: 47137188-47137687 Glycine max
Glyma.20G240000 1.0kb upstream 1.0kb upstream 7325 true Chr20: 47137688-47145012 Glycine max
Glyma.20G240000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 47144013-47145012 Glycine max
Glyma.20G240000 1.0kb downstream 1.0kb downstream 7325 true Chr20: 47136688-47144012 Glycine max
Glyma.20G240000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 47136688-47137687 Glycine max
Glyma.20G240000 2.0kb upstream 2.0kb upstream 8325 true Chr20: 47137688-47146012 Glycine max
Glyma.20G240000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 47144013-47146012 Glycine max
Glyma.20G240000 2.0kb downstream 2.0kb downstream 8325 true Chr20: 47135688-47144012 Glycine max
Glyma.20G240000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 47135688-47137687 Glycine max
Glyma.20G240000 5.0kb upstream 5.0kb upstream 11325 true Chr20: 47137688-47149012 Glycine max
Glyma.20G240000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 47144013-47149012 Glycine max
Glyma.20G240000 5.0kb downstream 5.0kb downstream 11325 true Chr20: 47132688-47144012 Glycine max
Glyma.20G240000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 47132688-47137687 Glycine max
Glyma.20G240000 10.0kb upstream 10.0kb upstream 16325 true Chr20: 47137688-47154012 Glycine max
Glyma.20G240000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 47144013-47154012 Glycine max
Glyma.20G240000 10.0kb downstream 10.0kb downstream 16325 true Chr20: 47127688-47144012 Glycine max
Glyma.20G240000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 47127688-47137687 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310908 5265 Fabidae View MSA
124068580 5270 Rosid View MSA
123738133 5271 Pentapetalae View MSA
122790534 5272 Eudicot View MSA
122047167 5273 Angiosperm View MSA
121346826 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.61133 0.0 5.44708   Low
cufflinks 9.12406 0.0 24.9268   High
cufflinks 2.48872 0.0 7.90929    
cufflinks 4.07372 0.0 12.1101    
cufflinks 3.28393 0.0 10.0789    
cufflinks 1.98851 0.0 6.53546    
cufflinks 14.7617 0.0 39.4716   High
cufflinks 2.93957 0.0 9.16457    
cufflinks 3.57272 0.0 10.8259    
cufflinks 2.623        
cufflinks 1.064        
cufflinks 1.772        
cufflinks 1.311        
cufflinks 1.493        
cufflinks 0.438       Low
cufflinks 2.411        
cufflinks 0.398       Low
cufflinks 3.019       High
cufflinks 3.501       High
cufflinks 2.396        
cufflinks 0.582       Low
cufflinks 2.214        
cufflinks 2.388        
cufflinks 1.915        
cufflinks 2.467        
cufflinks 0.818        

0 Strain