Gene : Glyma.20G240100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31871:SF10 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K5K13 Genomic Order:  2401
Name:  ? Glyma.20G240100 Secondary Identifier:  ? PAC:30519975
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G240100 0.5kb upstream 0.5kb upstream 2268 true Chr20: 47154197-47156464 Glycine max
Glyma.20G240100 0.5kb upstream 0.5kb upstream 500 false Chr20: 47154197-47154696 Glycine max
Glyma.20G240100 0.5kb downstream 0.5kb downstream 2268 true Chr20: 47154697-47156964 Glycine max
Glyma.20G240100 0.5kb downstream 0.5kb downstream 500 false Chr20: 47156465-47156964 Glycine max
Glyma.20G240100 1.0kb upstream 1.0kb upstream 2768 true Chr20: 47153697-47156464 Glycine max
Glyma.20G240100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 47153697-47154696 Glycine max
Glyma.20G240100 1.0kb downstream 1.0kb downstream 2768 true Chr20: 47154697-47157464 Glycine max
Glyma.20G240100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 47156465-47157464 Glycine max
Glyma.20G240100 2.0kb upstream 2.0kb upstream 3768 true Chr20: 47152697-47156464 Glycine max
Glyma.20G240100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 47152697-47154696 Glycine max
Glyma.20G240100 2.0kb downstream 2.0kb downstream 3768 true Chr20: 47154697-47158464 Glycine max
Glyma.20G240100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 47156465-47158464 Glycine max
Glyma.20G240100 5.0kb upstream 5.0kb upstream 6768 true Chr20: 47149697-47156464 Glycine max
Glyma.20G240100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 47149697-47154696 Glycine max
Glyma.20G240100 5.0kb downstream 5.0kb downstream 6768 true Chr20: 47154697-47161464 Glycine max
Glyma.20G240100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 47156465-47161464 Glycine max
Glyma.20G240100 10.0kb upstream 10.0kb upstream 11768 true Chr20: 47144697-47156464 Glycine max
Glyma.20G240100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 47144697-47154696 Glycine max
Glyma.20G240100 10.0kb downstream 10.0kb downstream 11768 true Chr20: 47154697-47166464 Glycine max
Glyma.20G240100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 47156465-47166464 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314737 5265 Fabidae View MSA
124070789 5270 Rosid View MSA
123747492 5271 Pentapetalae View MSA
122795039 5272 Eudicot View MSA
122043868 5273 Angiosperm View MSA
121310203 5274 Embryophyte View MSA
123347760 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.086     Low  
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain