Gene : Glyma.20G240600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11614:SF92 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN-RELATED Genomic Order:  2406
Name:  ? Glyma.20G240600 Secondary Identifier:  ? PAC:30520602
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7420 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G240600 0.5kb upstream 0.5kb upstream 5582 true Chr20: 47178341-47183922 Glycine max
Glyma.20G240600 0.5kb upstream 0.5kb upstream 500 false Chr20: 47183423-47183922 Glycine max
Glyma.20G240600 0.5kb downstream 0.5kb downstream 5582 true Chr20: 47177841-47183422 Glycine max
Glyma.20G240600 0.5kb downstream 0.5kb downstream 500 false Chr20: 47177841-47178340 Glycine max
Glyma.20G240600 1.0kb upstream 1.0kb upstream 6082 true Chr20: 47178341-47184422 Glycine max
Glyma.20G240600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 47183423-47184422 Glycine max
Glyma.20G240600 1.0kb downstream 1.0kb downstream 6082 true Chr20: 47177341-47183422 Glycine max
Glyma.20G240600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 47177341-47178340 Glycine max
Glyma.20G240600 2.0kb upstream 2.0kb upstream 7082 true Chr20: 47178341-47185422 Glycine max
Glyma.20G240600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 47183423-47185422 Glycine max
Glyma.20G240600 2.0kb downstream 2.0kb downstream 7082 true Chr20: 47176341-47183422 Glycine max
Glyma.20G240600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 47176341-47178340 Glycine max
Glyma.20G240600 5.0kb upstream 5.0kb upstream 10082 true Chr20: 47178341-47188422 Glycine max
Glyma.20G240600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 47183423-47188422 Glycine max
Glyma.20G240600 5.0kb downstream 5.0kb downstream 10082 true Chr20: 47173341-47183422 Glycine max
Glyma.20G240600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 47173341-47178340 Glycine max
Glyma.20G240600 10.0kb upstream 10.0kb upstream 15082 true Chr20: 47178341-47193422 Glycine max
Glyma.20G240600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 47183423-47193422 Glycine max
Glyma.20G240600 10.0kb downstream 10.0kb downstream 15082 true Chr20: 47168341-47183422 Glycine max
Glyma.20G240600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 47168341-47178340 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302200 5265 Fabidae View MSA
124061404 5270 Rosid View MSA
123753493 5271 Pentapetalae View MSA
122796454 5272 Eudicot View MSA
122051494 5273 Angiosperm View MSA
121350082 5274 Embryophyte View MSA
123428617 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.36346 0.0 7.34512    
cufflinks 2.22509 0.0 10.6239    
cufflinks 2.10958 0.0 10.0891    
cufflinks 0.408102 0.0 2.0274    
cufflinks 4.08324 0.0 15.9724    
cufflinks 78.1824 0.0 290.697 High High
cufflinks 0.122315 0.0 0.483643 Low Low
cufflinks 0.424421 0.0 2.72122    
cufflinks 4.27635 0.0 16.4385    
cufflinks 0.945        
cufflinks 5.824     High High
cufflinks 0.463        
cufflinks 1.305        
cufflinks 0.657        
cufflinks 0.125       Low
cufflinks 0.715        
cufflinks 2.684        
cufflinks 0.701        
cufflinks 1.18        
cufflinks 0.562        
cufflinks 2.912        
cufflinks 0.591        
cufflinks 1.297        
cufflinks 7.169     High High
cufflinks 0.685        
cufflinks 7.116     High High

0 Strain