Gene : Glyma.20G242200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11178:SF1 - NFU1 IRON-SULFUR CLUSTER SCAFFOLD HOMOLOG, MITOCHONDRIAL Genomic Order:  2422
Name:  ? Glyma.20G242200 Secondary Identifier:  ? PAC:30521830
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G242200 0.5kb upstream 0.5kb upstream 5065 true Chr20: 47307891-47312955 Glycine max
Glyma.20G242200 0.5kb upstream 0.5kb upstream 500 false Chr20: 47312456-47312955 Glycine max
Glyma.20G242200 0.5kb downstream 0.5kb downstream 5065 true Chr20: 47307391-47312455 Glycine max
Glyma.20G242200 0.5kb downstream 0.5kb downstream 500 false Chr20: 47307391-47307890 Glycine max
Glyma.20G242200 1.0kb upstream 1.0kb upstream 5565 true Chr20: 47307891-47313455 Glycine max
Glyma.20G242200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 47312456-47313455 Glycine max
Glyma.20G242200 1.0kb downstream 1.0kb downstream 5565 true Chr20: 47306891-47312455 Glycine max
Glyma.20G242200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 47306891-47307890 Glycine max
Glyma.20G242200 2.0kb upstream 2.0kb upstream 6565 true Chr20: 47307891-47314455 Glycine max
Glyma.20G242200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 47312456-47314455 Glycine max
Glyma.20G242200 2.0kb downstream 2.0kb downstream 6565 true Chr20: 47305891-47312455 Glycine max
Glyma.20G242200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 47305891-47307890 Glycine max
Glyma.20G242200 5.0kb upstream 5.0kb upstream 9565 true Chr20: 47307891-47317455 Glycine max
Glyma.20G242200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 47312456-47317455 Glycine max
Glyma.20G242200 5.0kb downstream 5.0kb downstream 9565 true Chr20: 47302891-47312455 Glycine max
Glyma.20G242200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 47302891-47307890 Glycine max
Glyma.20G242200 10.0kb upstream 10.0kb upstream 14565 true Chr20: 47307891-47322455 Glycine max
Glyma.20G242200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 47312456-47322455 Glycine max
Glyma.20G242200 10.0kb downstream 10.0kb downstream 14565 true Chr20: 47297891-47312455 Glycine max
Glyma.20G242200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 47297891-47307890 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300319 5265 Fabidae View MSA
124067636 5270 Rosid View MSA
123740613 5271 Pentapetalae View MSA
122791605 5272 Eudicot View MSA
122043345 5273 Angiosperm View MSA
121344774 5274 Embryophyte View MSA
123425135 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4875 0.0 52.3368   High
cufflinks 8.87536 0.0 29.0535    
cufflinks 13.2926 0.0 40.7544    
cufflinks 9.13598 0.0 29.7449    
cufflinks 13.7059 0.0 41.7588    
cufflinks 20.9018 0.0 62.146   High
cufflinks 6.45262 0.0 22.8002   Low
cufflinks 11.1698 0.0 35.118    
cufflinks 10.9936 0.0 34.7248    
cufflinks 3.003        
cufflinks 2.378       Low
cufflinks 2.899        
cufflinks 4.424       High
cufflinks 5.097       High
cufflinks 2.151       Low
cufflinks 3.202        
cufflinks 3.744        
cufflinks 2.489        
cufflinks 2.467       Low
cufflinks 2.936        
cufflinks 2.612        
cufflinks 3.387        
cufflinks 3.231        
cufflinks 3.284        
cufflinks 3.19        
cufflinks 3.203        

0 Strain