Gene : Glyma.20G229500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23257//PTHR23257:SF335 - SERINE-THREONINE PROTEIN KINASE Genomic Order:  2295
Name:  ? Glyma.20G229500 Secondary Identifier:  ? PAC:30519746
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G229500 0.5kb upstream 0.5kb upstream 8715 true Chr20: 46371032-46379746 Glycine max
Glyma.20G229500 0.5kb upstream 0.5kb upstream 500 false Chr20: 46371032-46371531 Glycine max
Glyma.20G229500 0.5kb downstream 0.5kb downstream 8715 true Chr20: 46371532-46380246 Glycine max
Glyma.20G229500 0.5kb downstream 0.5kb downstream 500 false Chr20: 46379747-46380246 Glycine max
Glyma.20G229500 1.0kb upstream 1.0kb upstream 9215 true Chr20: 46370532-46379746 Glycine max
Glyma.20G229500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 46370532-46371531 Glycine max
Glyma.20G229500 1.0kb downstream 1.0kb downstream 9215 true Chr20: 46371532-46380746 Glycine max
Glyma.20G229500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 46379747-46380746 Glycine max
Glyma.20G229500 2.0kb upstream 2.0kb upstream 10215 true Chr20: 46369532-46379746 Glycine max
Glyma.20G229500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 46369532-46371531 Glycine max
Glyma.20G229500 2.0kb downstream 2.0kb downstream 10215 true Chr20: 46371532-46381746 Glycine max
Glyma.20G229500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 46379747-46381746 Glycine max
Glyma.20G229500 5.0kb upstream 5.0kb upstream 13215 true Chr20: 46366532-46379746 Glycine max
Glyma.20G229500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 46366532-46371531 Glycine max
Glyma.20G229500 5.0kb downstream 5.0kb downstream 13215 true Chr20: 46371532-46384746 Glycine max
Glyma.20G229500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 46379747-46384746 Glycine max
Glyma.20G229500 10.0kb upstream 10.0kb upstream 18215 true Chr20: 46361532-46379746 Glycine max
Glyma.20G229500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 46361532-46371531 Glycine max
Glyma.20G229500 10.0kb downstream 10.0kb downstream 18215 true Chr20: 46371532-46389746 Glycine max
Glyma.20G229500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 46379747-46389746 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309694 5265 Fabidae View MSA
124069123 5270 Rosid View MSA
123738412 5271 Pentapetalae View MSA
122795916 5272 Eudicot View MSA
122044929 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121347926 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.63424 0.0 19.7648   Low
cufflinks 4.71012 0.0 17.1318   Low
cufflinks 12.2272 0.0 42.1134   High
cufflinks 11.4659 0.0 47.9285    
cufflinks 7.72126 0.0 31.6912    
cufflinks 7.78739 0.0 26.5265    
cufflinks 11.2199 0.0 38.6998    
cufflinks 10.2838 0.0 35.0386    
cufflinks 7.26764 0.0 29.4053    
cufflinks 1.337        
cufflinks 1.363        
cufflinks 1.607       High
cufflinks 1.313        
cufflinks 1.232        
cufflinks 1.709       High
cufflinks 1.162        
cufflinks 1.55       High
cufflinks 1.497        
cufflinks 0.974       Low
cufflinks 1.057        
cufflinks 1.206        
cufflinks 0.992       Low
cufflinks 0.785       Low
cufflinks 1.442        
cufflinks 1.037        
cufflinks 1.381        

0 Strain