Gene : Glyma.20G232000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12749 - EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1 Genomic Order:  2320
Name:  ? Glyma.20G232000 Secondary Identifier:  ? PAC:30520234
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G232000 0.5kb upstream 0.5kb upstream 3009 true Chr20: 46558004-46561012 Glycine max
Glyma.20G232000 0.5kb upstream 0.5kb upstream 500 false Chr20: 46558004-46558503 Glycine max
Glyma.20G232000 0.5kb downstream 0.5kb downstream 3009 true Chr20: 46558504-46561512 Glycine max
Glyma.20G232000 0.5kb downstream 0.5kb downstream 500 false Chr20: 46561013-46561512 Glycine max
Glyma.20G232000 1.0kb upstream 1.0kb upstream 3509 true Chr20: 46557504-46561012 Glycine max
Glyma.20G232000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 46557504-46558503 Glycine max
Glyma.20G232000 1.0kb downstream 1.0kb downstream 3509 true Chr20: 46558504-46562012 Glycine max
Glyma.20G232000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 46561013-46562012 Glycine max
Glyma.20G232000 2.0kb upstream 2.0kb upstream 4509 true Chr20: 46556504-46561012 Glycine max
Glyma.20G232000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 46556504-46558503 Glycine max
Glyma.20G232000 2.0kb downstream 2.0kb downstream 4509 true Chr20: 46558504-46563012 Glycine max
Glyma.20G232000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 46561013-46563012 Glycine max
Glyma.20G232000 5.0kb upstream 5.0kb upstream 7509 true Chr20: 46553504-46561012 Glycine max
Glyma.20G232000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 46553504-46558503 Glycine max
Glyma.20G232000 5.0kb downstream 5.0kb downstream 7509 true Chr20: 46558504-46566012 Glycine max
Glyma.20G232000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 46561013-46566012 Glycine max
Glyma.20G232000 10.0kb upstream 10.0kb upstream 12509 true Chr20: 46548504-46561012 Glycine max
Glyma.20G232000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 46548504-46558503 Glycine max
Glyma.20G232000 10.0kb downstream 10.0kb downstream 12509 true Chr20: 46558504-46571012 Glycine max
Glyma.20G232000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 46561013-46571012 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121658047 5273 Angiosperm View MSA
122238289 5265 Fabidae Singleton cluster - no MSA
124040974 5270 Rosid View MSA
123612073 5271 Pentapetalae View MSA
122646597 5272 Eudicot View MSA
120930064 5274 Embryophyte View MSA
123426458 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.244483 0.0 0.969516 Low High
cufflinks 0.0584432 0.0 0.250057 Low  
cufflinks 0.0338354 0.0 0.151828 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.176256 0.0 0.707572 Low High
cufflinks 0.0276279 0.0 0.126542 Low Low
cufflinks 0.0606792 0.0 0.258748 Low  
cufflinks 0.0616319 0.0 0.262667 Low  
cufflinks 0.154        
cufflinks 0.129        
cufflinks 0.543       High
cufflinks 0.032     Low Low
cufflinks 0.073        
cufflinks 0.159        
cufflinks 0.252        
cufflinks 0.047     Low Low
cufflinks 1.212       High
cufflinks 0.843       High
cufflinks 0.203        
cufflinks 0.114        
cufflinks 0.212        
cufflinks 0.064     Low  
cufflinks 0.124        
cufflinks 0.237        
cufflinks 0.057     Low Low

0 Strain