Gene : Glyma.20G232700 G. max Wm82.a2.v1
Defline:  (1 of 40) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  2327
Name:  ? Glyma.20G232700 Secondary Identifier:  ? PAC:30521972
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G232700 0.5kb upstream 0.5kb upstream 3224 true Chr20: 46602323-46605546 Glycine max
Glyma.20G232700 0.5kb upstream 0.5kb upstream 500 false Chr20: 46602323-46602822 Glycine max
Glyma.20G232700 0.5kb downstream 0.5kb downstream 3224 true Chr20: 46602823-46606046 Glycine max
Glyma.20G232700 0.5kb downstream 0.5kb downstream 500 false Chr20: 46605547-46606046 Glycine max
Glyma.20G232700 1.0kb upstream 1.0kb upstream 3724 true Chr20: 46601823-46605546 Glycine max
Glyma.20G232700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 46601823-46602822 Glycine max
Glyma.20G232700 1.0kb downstream 1.0kb downstream 3724 true Chr20: 46602823-46606546 Glycine max
Glyma.20G232700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 46605547-46606546 Glycine max
Glyma.20G232700 2.0kb upstream 2.0kb upstream 4724 true Chr20: 46600823-46605546 Glycine max
Glyma.20G232700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 46600823-46602822 Glycine max
Glyma.20G232700 2.0kb downstream 2.0kb downstream 4724 true Chr20: 46602823-46607546 Glycine max
Glyma.20G232700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 46605547-46607546 Glycine max
Glyma.20G232700 5.0kb upstream 5.0kb upstream 7724 true Chr20: 46597823-46605546 Glycine max
Glyma.20G232700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 46597823-46602822 Glycine max
Glyma.20G232700 5.0kb downstream 5.0kb downstream 7724 true Chr20: 46602823-46610546 Glycine max
Glyma.20G232700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 46605547-46610546 Glycine max
Glyma.20G232700 10.0kb upstream 10.0kb upstream 12724 true Chr20: 46592823-46605546 Glycine max
Glyma.20G232700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 46592823-46602822 Glycine max
Glyma.20G232700 10.0kb downstream 10.0kb downstream 12724 true Chr20: 46602823-46615546 Glycine max
Glyma.20G232700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 46605547-46615546 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299669 5265 Fabidae View MSA
124063481 5270 Rosid View MSA
123746549 5271 Pentapetalae View MSA
122794613 5272 Eudicot View MSA
122049761 5273 Angiosperm View MSA
121347435 5274 Embryophyte View MSA
123380549 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.8905 0.0 6.28145    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0337271 0.0 0.140831 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.566        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.004     Low Low
cufflinks 0.368        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.371        
cufflinks 0.843       High
cufflinks 0.007     Low Low
cufflinks 0.442        
cufflinks 0.009     Low  

0 Strain