Gene : Glyma.20G233000 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR24322:SF566 - GLUCOSE AND RIBITOL DEHYDROGENASE HOMOLOG 1-RELATED Genomic Order:  2330
Name:  ? Glyma.20G233000 Secondary Identifier:  ? PAC:30521921
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G233000 0.5kb upstream 0.5kb upstream 2239 true Chr20: 46613757-46615995 Glycine max
Glyma.20G233000 0.5kb upstream 0.5kb upstream 500 false Chr20: 46615496-46615995 Glycine max
Glyma.20G233000 0.5kb downstream 0.5kb downstream 2239 true Chr20: 46613257-46615495 Glycine max
Glyma.20G233000 0.5kb downstream 0.5kb downstream 500 false Chr20: 46613257-46613756 Glycine max
Glyma.20G233000 1.0kb upstream 1.0kb upstream 2739 true Chr20: 46613757-46616495 Glycine max
Glyma.20G233000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 46615496-46616495 Glycine max
Glyma.20G233000 1.0kb downstream 1.0kb downstream 2739 true Chr20: 46612757-46615495 Glycine max
Glyma.20G233000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 46612757-46613756 Glycine max
Glyma.20G233000 2.0kb upstream 2.0kb upstream 3739 true Chr20: 46613757-46617495 Glycine max
Glyma.20G233000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 46615496-46617495 Glycine max
Glyma.20G233000 2.0kb downstream 2.0kb downstream 3739 true Chr20: 46611757-46615495 Glycine max
Glyma.20G233000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 46611757-46613756 Glycine max
Glyma.20G233000 5.0kb upstream 5.0kb upstream 6739 true Chr20: 46613757-46620495 Glycine max
Glyma.20G233000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 46615496-46620495 Glycine max
Glyma.20G233000 5.0kb downstream 5.0kb downstream 6739 true Chr20: 46608757-46615495 Glycine max
Glyma.20G233000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 46608757-46613756 Glycine max
Glyma.20G233000 10.0kb upstream 10.0kb upstream 11739 true Chr20: 46613757-46625495 Glycine max
Glyma.20G233000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 46615496-46625495 Glycine max
Glyma.20G233000 10.0kb downstream 10.0kb downstream 11739 true Chr20: 46603757-46615495 Glycine max
Glyma.20G233000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 46603757-46613756 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315143 5265 Fabidae View MSA
124062635 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.033526 0.0 0.142871 Low  
cufflinks 0.11752 0.0 0.468282 Low  
cufflinks 0.107034 0.0 0.427612 Low  
cufflinks 0.793309 0.0 2.90976    
cufflinks 0.412459 0.0 1.56096    
cufflinks 0.412778 0.0 1.56325    
cufflinks 877.607 0.0 4854.46 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.187391 0.0 0.7339 Low  
cufflinks 0.139        
cufflinks 0.023     Low Low
cufflinks 0.604        
cufflinks 0.53        
cufflinks 0.693       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.197        
cufflinks 0.149        
cufflinks 2.798       High
cufflinks 0.153        
cufflinks 0.231        
cufflinks 0.046     Low Low
cufflinks 0.139        
cufflinks 0.346        
cufflinks 0.044     Low Low
cufflinks 0.151        
cufflinks 0.036     Low Low

0 Strain