Gene : Glyma.20G233700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR24072//PTHR24072:SF166 - RHO FAMILY GTPASE Genomic Order:  2337
Name:  ? Glyma.20G233700 Secondary Identifier:  ? PAC:30520566
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G233700 0.5kb upstream 0.5kb upstream 9198 true Chr20: 46643935-46653132 Glycine max
Glyma.20G233700 0.5kb upstream 0.5kb upstream 500 false Chr20: 46643935-46644434 Glycine max
Glyma.20G233700 0.5kb downstream 0.5kb downstream 9198 true Chr20: 46644435-46653632 Glycine max
Glyma.20G233700 0.5kb downstream 0.5kb downstream 500 false Chr20: 46653133-46653632 Glycine max
Glyma.20G233700 1.0kb upstream 1.0kb upstream 9698 true Chr20: 46643435-46653132 Glycine max
Glyma.20G233700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 46643435-46644434 Glycine max
Glyma.20G233700 1.0kb downstream 1.0kb downstream 9698 true Chr20: 46644435-46654132 Glycine max
Glyma.20G233700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 46653133-46654132 Glycine max
Glyma.20G233700 2.0kb upstream 2.0kb upstream 10698 true Chr20: 46642435-46653132 Glycine max
Glyma.20G233700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 46642435-46644434 Glycine max
Glyma.20G233700 2.0kb downstream 2.0kb downstream 10698 true Chr20: 46644435-46655132 Glycine max
Glyma.20G233700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 46653133-46655132 Glycine max
Glyma.20G233700 5.0kb upstream 5.0kb upstream 13698 true Chr20: 46639435-46653132 Glycine max
Glyma.20G233700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 46639435-46644434 Glycine max
Glyma.20G233700 5.0kb downstream 5.0kb downstream 13698 true Chr20: 46644435-46658132 Glycine max
Glyma.20G233700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 46653133-46658132 Glycine max
Glyma.20G233700 10.0kb upstream 10.0kb upstream 18698 true Chr20: 46634435-46653132 Glycine max
Glyma.20G233700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 46634435-46644434 Glycine max
Glyma.20G233700 10.0kb downstream 10.0kb downstream 18698 true Chr20: 46644435-46663132 Glycine max
Glyma.20G233700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 46653133-46663132 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308432 5265 Fabidae View MSA
124072743 5270 Rosid View MSA
123746250 5271 Pentapetalae View MSA
122793310 5272 Eudicot View MSA
122043927 5273 Angiosperm View MSA
121347375 5274 Embryophyte View MSA
123428304 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.4479 0.0 73.5885    
cufflinks 16.0158 0.0 56.0017   Low
cufflinks 18.2098 0.0 64.9911    
cufflinks 28.7634 0.0 110.467 High High
cufflinks 24.5723 0.0 91.1534 High  
cufflinks 14.7004 0.0 44.0765   Low
cufflinks 24.6913 0.0 92.3103 High  
cufflinks 23.2402 0.0 84.6992 High  
cufflinks 18.7662 0.0 67.4889    
cufflinks 3.371        
cufflinks 1.973       Low
cufflinks 3.853        
cufflinks 4.173       High
cufflinks 4.757       High
cufflinks 2.183       Low
cufflinks 2.937        
cufflinks 2.314       Low
cufflinks 3.884       High
cufflinks 3.865       High
cufflinks 3.067        
cufflinks 2.346        
cufflinks 3.127        
cufflinks 2.735        
cufflinks 2.445        
cufflinks 2.971        
cufflinks 2.497        

0 Strain