Gene : Glyma.20G228300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31662:SF6 - DNA-BINDING STOREKEEPER PROTEIN-RELATED TRANSCRIPTIONAL REGULATOR Genomic Order:  2283
Name:  ? Glyma.20G228300 Secondary Identifier:  ? PAC:30522707
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G228300 0.5kb upstream 0.5kb upstream 1725 true Chr20: 46275832-46277556 Glycine max
Glyma.20G228300 0.5kb upstream 0.5kb upstream 500 false Chr20: 46277057-46277556 Glycine max
Glyma.20G228300 0.5kb downstream 0.5kb downstream 1725 true Chr20: 46275332-46277056 Glycine max
Glyma.20G228300 0.5kb downstream 0.5kb downstream 500 false Chr20: 46275332-46275831 Glycine max
Glyma.20G228300 1.0kb upstream 1.0kb upstream 2225 true Chr20: 46275832-46278056 Glycine max
Glyma.20G228300 1.0kb upstream 1.0kb upstream 1000 false Chr20: 46277057-46278056 Glycine max
Glyma.20G228300 1.0kb downstream 1.0kb downstream 2225 true Chr20: 46274832-46277056 Glycine max
Glyma.20G228300 1.0kb downstream 1.0kb downstream 1000 false Chr20: 46274832-46275831 Glycine max
Glyma.20G228300 2.0kb upstream 2.0kb upstream 3225 true Chr20: 46275832-46279056 Glycine max
Glyma.20G228300 2.0kb upstream 2.0kb upstream 2000 false Chr20: 46277057-46279056 Glycine max
Glyma.20G228300 2.0kb downstream 2.0kb downstream 3225 true Chr20: 46273832-46277056 Glycine max
Glyma.20G228300 2.0kb downstream 2.0kb downstream 2000 false Chr20: 46273832-46275831 Glycine max
Glyma.20G228300 5.0kb upstream 5.0kb upstream 6225 true Chr20: 46275832-46282056 Glycine max
Glyma.20G228300 5.0kb upstream 5.0kb upstream 5000 false Chr20: 46277057-46282056 Glycine max
Glyma.20G228300 5.0kb downstream 5.0kb downstream 6225 true Chr20: 46270832-46277056 Glycine max
Glyma.20G228300 5.0kb downstream 5.0kb downstream 5000 false Chr20: 46270832-46275831 Glycine max
Glyma.20G228300 10.0kb upstream 10.0kb upstream 11225 true Chr20: 46275832-46287056 Glycine max
Glyma.20G228300 10.0kb upstream 10.0kb upstream 10000 false Chr20: 46277057-46287056 Glycine max
Glyma.20G228300 10.0kb downstream 10.0kb downstream 11225 true Chr20: 46265832-46277056 Glycine max
Glyma.20G228300 10.0kb downstream 10.0kb downstream 10000 false Chr20: 46265832-46275831 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296905 5265 Fabidae View MSA
124042740 5270 Rosid View MSA
123751469 5271 Pentapetalae View MSA
122797914 5272 Eudicot View MSA
122051487 5273 Angiosperm View MSA
121348911 5274 Embryophyte View MSA
123381074 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.01683 0.0 0.0761138 Low Low
cufflinks 0.049686 0.0 0.206038 Low  
cufflinks 2.02816 0.0 6.92516   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0702817 0.0 0.285509 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.101195 0.0 0.404795 Low  
cufflinks 0.0965193 0.0 0.386745 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.472       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.897       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  

0 Strain