Gene : Glyma.20G228500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31662:SF6 - DNA-BINDING STOREKEEPER PROTEIN-RELATED TRANSCRIPTIONAL REGULATOR Genomic Order:  2285
Name:  ? Glyma.20G228500 Secondary Identifier:  ? PAC:30520670
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G228500 0.5kb upstream 0.5kb upstream 2031 true Chr20: 46284521-46286551 Glycine max
Glyma.20G228500 0.5kb upstream 0.5kb upstream 500 false Chr20: 46284521-46285020 Glycine max
Glyma.20G228500 0.5kb downstream 0.5kb downstream 2031 true Chr20: 46285021-46287051 Glycine max
Glyma.20G228500 0.5kb downstream 0.5kb downstream 500 false Chr20: 46286552-46287051 Glycine max
Glyma.20G228500 1.0kb upstream 1.0kb upstream 2531 true Chr20: 46284021-46286551 Glycine max
Glyma.20G228500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 46284021-46285020 Glycine max
Glyma.20G228500 1.0kb downstream 1.0kb downstream 2531 true Chr20: 46285021-46287551 Glycine max
Glyma.20G228500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 46286552-46287551 Glycine max
Glyma.20G228500 2.0kb upstream 2.0kb upstream 3531 true Chr20: 46283021-46286551 Glycine max
Glyma.20G228500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 46283021-46285020 Glycine max
Glyma.20G228500 2.0kb downstream 2.0kb downstream 3531 true Chr20: 46285021-46288551 Glycine max
Glyma.20G228500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 46286552-46288551 Glycine max
Glyma.20G228500 5.0kb upstream 5.0kb upstream 6531 true Chr20: 46280021-46286551 Glycine max
Glyma.20G228500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 46280021-46285020 Glycine max
Glyma.20G228500 5.0kb downstream 5.0kb downstream 6531 true Chr20: 46285021-46291551 Glycine max
Glyma.20G228500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 46286552-46291551 Glycine max
Glyma.20G228500 10.0kb upstream 10.0kb upstream 11531 true Chr20: 46275021-46286551 Glycine max
Glyma.20G228500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 46275021-46285020 Glycine max
Glyma.20G228500 10.0kb downstream 10.0kb downstream 11531 true Chr20: 46285021-46296551 Glycine max
Glyma.20G228500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 46286552-46296551 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297969 5265 Fabidae View MSA
124072235 5270 Rosid View MSA
123751469 5271 Pentapetalae View MSA
122797914 5272 Eudicot View MSA
122051487 5273 Angiosperm View MSA
121348911 5274 Embryophyte View MSA
123381074 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.26744 0.0 20.4959    
cufflinks 3.10216 0.0 9.83516   Low
cufflinks 14.7167 0.0 39.634   High
cufflinks 4.42385 0.0 13.3325    
cufflinks 6.52511 0.0 18.5432    
cufflinks 10.4063 0.0 28.444   High
cufflinks 5.27419 0.0 15.4716    
cufflinks 4.96161 0.0 14.7275    
cufflinks 5.27971 0.0 15.4926    
cufflinks 5.407        
cufflinks 13.093     High High
cufflinks 11.562     High  
cufflinks 5.163        
cufflinks 6.29        
cufflinks 3.387       Low
cufflinks 4.824        
cufflinks 19.729     High High
cufflinks 6.539        
cufflinks 4.159        
cufflinks 4.457        
cufflinks 10.836     High  
cufflinks 4.808        
cufflinks 5.306        
cufflinks 18.302     High High
cufflinks 3.618       Low
cufflinks 13.822     High High

0 Strain