Gene : Glyma.U010500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11668//PTHR11668:SF243 - SERINE/THREONINE PROTEIN PHOSPHATASE Genomic Order:  14
Name:  ? Glyma.U010500 Secondary Identifier:  ? PAC:30535319
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U010500 0.5kb upstream 0.5kb upstream 15053 true scaffold_21: 274375-289427 Glycine max
Glyma.U010500 0.5kb upstream 0.5kb upstream 500 false scaffold_21: 288928-289427 Glycine max
Glyma.U010500 0.5kb downstream 0.5kb downstream 15053 true scaffold_21: 273875-288927 Glycine max
Glyma.U010500 0.5kb downstream 0.5kb downstream 500 false scaffold_21: 273875-274374 Glycine max
Glyma.U010500 1.0kb upstream 1.0kb upstream 15553 true scaffold_21: 274375-289927 Glycine max
Glyma.U010500 1.0kb upstream 1.0kb upstream 1000 false scaffold_21: 288928-289927 Glycine max
Glyma.U010500 1.0kb downstream 1.0kb downstream 15553 true scaffold_21: 273375-288927 Glycine max
Glyma.U010500 1.0kb downstream 1.0kb downstream 1000 false scaffold_21: 273375-274374 Glycine max
Glyma.U010500 2.0kb upstream 2.0kb upstream 16553 true scaffold_21: 274375-290927 Glycine max
Glyma.U010500 2.0kb upstream 2.0kb upstream 2000 false scaffold_21: 288928-290927 Glycine max
Glyma.U010500 2.0kb downstream 2.0kb downstream 16553 true scaffold_21: 272375-288927 Glycine max
Glyma.U010500 2.0kb downstream 2.0kb downstream 2000 false scaffold_21: 272375-274374 Glycine max
Glyma.U010500 5.0kb upstream 5.0kb upstream 19553 true scaffold_21: 274375-293927 Glycine max
Glyma.U010500 5.0kb upstream 5.0kb upstream 5000 false scaffold_21: 288928-293927 Glycine max
Glyma.U010500 5.0kb downstream 5.0kb downstream 19553 true scaffold_21: 269375-288927 Glycine max
Glyma.U010500 5.0kb downstream 5.0kb downstream 5000 false scaffold_21: 269375-274374 Glycine max
Glyma.U010500 10.0kb upstream 10.0kb upstream 24553 true scaffold_21: 274375-298927 Glycine max
Glyma.U010500 10.0kb upstream 10.0kb upstream 10000 false scaffold_21: 288928-298927 Glycine max
Glyma.U010500 10.0kb downstream 10.0kb downstream 24553 true scaffold_21: 264375-288927 Glycine max
Glyma.U010500 10.0kb downstream 10.0kb downstream 10000 false scaffold_21: 264375-274374 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312704 5265 Fabidae View MSA
124066080 5270 Rosid View MSA
123748320 5271 Pentapetalae View MSA
122790760 5272 Eudicot View MSA
122049960 5273 Angiosperm View MSA
121349504 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.1174 0.0 24.3491    
cufflinks 4.96327 0.0 17.4268    
cufflinks 9.16395 0.0 31.5337   High
cufflinks 7.5301 0.0 25.7361    
cufflinks 6.5372 0.0 22.4213    
cufflinks 4.00898 0.0 12.3899   Low
cufflinks 6.13589 0.0 21.0693    
cufflinks 7.32663 0.0 24.99    
cufflinks 5.52237 0.0 19.0534    
cufflinks 1.06        
cufflinks 1.163        
cufflinks 1.091        
cufflinks 1.008        
cufflinks 0.951        
cufflinks 0.967        
cufflinks 1.084        
cufflinks 0.805       Low
cufflinks 1.019        
cufflinks 1.056        
cufflinks 1.077        
cufflinks 1.15        
cufflinks 1.148        
cufflinks 0.93       Low
cufflinks 1.236       High
cufflinks 1.126        
cufflinks 1.123        

0 Strain