Gene : Glyma.U011100 G. max Wm82.a2.v1
Defline:  (1 of 9) PF09366 - Protein of unknown function (DUF1997) (DUF1997) Genomic Order:  20
Name:  ? Glyma.U011100 Secondary Identifier:  ? PAC:30535457
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U011100 0.5kb upstream 0.5kb upstream 6466 true scaffold_21: 387058-393523 Glycine max
Glyma.U011100 0.5kb upstream 0.5kb upstream 500 false scaffold_21: 387058-387557 Glycine max
Glyma.U011100 0.5kb downstream 0.5kb downstream 6466 true scaffold_21: 387558-394023 Glycine max
Glyma.U011100 0.5kb downstream 0.5kb downstream 500 false scaffold_21: 393524-394023 Glycine max
Glyma.U011100 1.0kb upstream 1.0kb upstream 6966 true scaffold_21: 386558-393523 Glycine max
Glyma.U011100 1.0kb upstream 1.0kb upstream 1000 false scaffold_21: 386558-387557 Glycine max
Glyma.U011100 1.0kb downstream 1.0kb downstream 6966 true scaffold_21: 387558-394523 Glycine max
Glyma.U011100 1.0kb downstream 1.0kb downstream 1000 false scaffold_21: 393524-394523 Glycine max
Glyma.U011100 2.0kb upstream 2.0kb upstream 7966 true scaffold_21: 385558-393523 Glycine max
Glyma.U011100 2.0kb upstream 2.0kb upstream 2000 false scaffold_21: 385558-387557 Glycine max
Glyma.U011100 2.0kb downstream 2.0kb downstream 7966 true scaffold_21: 387558-395523 Glycine max
Glyma.U011100 2.0kb downstream 2.0kb downstream 2000 false scaffold_21: 393524-395523 Glycine max
Glyma.U011100 5.0kb upstream 5.0kb upstream 10966 true scaffold_21: 382558-393523 Glycine max
Glyma.U011100 5.0kb upstream 5.0kb upstream 5000 false scaffold_21: 382558-387557 Glycine max
Glyma.U011100 5.0kb downstream 5.0kb downstream 10966 true scaffold_21: 387558-398523 Glycine max
Glyma.U011100 5.0kb downstream 5.0kb downstream 5000 false scaffold_21: 393524-398523 Glycine max
Glyma.U011100 10.0kb upstream 10.0kb upstream 15966 true scaffold_21: 377558-393523 Glycine max
Glyma.U011100 10.0kb upstream 10.0kb upstream 10000 false scaffold_21: 377558-387557 Glycine max
Glyma.U011100 10.0kb downstream 10.0kb downstream 15966 true scaffold_21: 387558-403523 Glycine max
Glyma.U011100 10.0kb downstream 10.0kb downstream 10000 false scaffold_21: 393524-403523 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299585 5265 Fabidae View MSA
124068915 5270 Rosid View MSA
123740182 5271 Pentapetalae View MSA
122791833 5272 Eudicot View MSA
122045233 5273 Angiosperm View MSA
121346827 5274 Embryophyte View MSA
123423879 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.11002 0.0 17.2097    
cufflinks 4.31337 0.0 24.8986    
cufflinks 0.920604 0.0 5.48643   Low
cufflinks 5.06969 0.0 20.4772   High
cufflinks 0.975181 0.0 7.86051   Low
cufflinks 0.940232 0.0 5.54684   Low
cufflinks 3.87933 0.0 17.704    
cufflinks 3.01316 0.0 17.0361    
cufflinks 1.59654 0.0 12.3052    
cufflinks 0.102        
cufflinks 0.005     Low Low
cufflinks 0.077     Low  
cufflinks 0.025     Low  
cufflinks 0.018     Low  
cufflinks 0.004     Low Low
cufflinks 0.235       High
cufflinks 0.005     Low Low
cufflinks 0.214        
cufflinks 0.118        
cufflinks 0.262       High
cufflinks 0.009     Low  
cufflinks 0.227       High
cufflinks 0.296       High
cufflinks 0.005     Low Low
cufflinks 0.24       High
cufflinks 0.009     Low  

0 Strain