Gene : Glyma.U011200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR32093:SF13 - SERINE/ARGININE REPETITIVE MATRIX PROTEIN 2 Genomic Order:  21
Name:  ? Glyma.U011200 Secondary Identifier:  ? PAC:30535386
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U011200 0.5kb upstream 0.5kb upstream 4670 true scaffold_21: 395316-399985 Glycine max
Glyma.U011200 0.5kb upstream 0.5kb upstream 500 false scaffold_21: 399486-399985 Glycine max
Glyma.U011200 0.5kb downstream 0.5kb downstream 4670 true scaffold_21: 394816-399485 Glycine max
Glyma.U011200 0.5kb downstream 0.5kb downstream 500 false scaffold_21: 394816-395315 Glycine max
Glyma.U011200 1.0kb upstream 1.0kb upstream 5170 true scaffold_21: 395316-400485 Glycine max
Glyma.U011200 1.0kb upstream 1.0kb upstream 1000 false scaffold_21: 399486-400485 Glycine max
Glyma.U011200 1.0kb downstream 1.0kb downstream 5170 true scaffold_21: 394316-399485 Glycine max
Glyma.U011200 1.0kb downstream 1.0kb downstream 1000 false scaffold_21: 394316-395315 Glycine max
Glyma.U011200 2.0kb upstream 2.0kb upstream 6170 true scaffold_21: 395316-401485 Glycine max
Glyma.U011200 2.0kb upstream 2.0kb upstream 2000 false scaffold_21: 399486-401485 Glycine max
Glyma.U011200 2.0kb downstream 2.0kb downstream 6170 true scaffold_21: 393316-399485 Glycine max
Glyma.U011200 2.0kb downstream 2.0kb downstream 2000 false scaffold_21: 393316-395315 Glycine max
Glyma.U011200 5.0kb upstream 5.0kb upstream 9170 true scaffold_21: 395316-404485 Glycine max
Glyma.U011200 5.0kb upstream 5.0kb upstream 5000 false scaffold_21: 399486-404485 Glycine max
Glyma.U011200 5.0kb downstream 5.0kb downstream 9170 true scaffold_21: 390316-399485 Glycine max
Glyma.U011200 5.0kb downstream 5.0kb downstream 5000 false scaffold_21: 390316-395315 Glycine max
Glyma.U011200 10.0kb upstream 10.0kb upstream 14170 true scaffold_21: 395316-409485 Glycine max
Glyma.U011200 10.0kb upstream 10.0kb upstream 10000 false scaffold_21: 399486-409485 Glycine max
Glyma.U011200 10.0kb downstream 10.0kb downstream 14170 true scaffold_21: 385316-399485 Glycine max
Glyma.U011200 10.0kb downstream 10.0kb downstream 10000 false scaffold_21: 385316-395315 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240584 5265 Fabidae Singleton cluster - no MSA
124069039 5270 Rosid View MSA
123741456 5271 Pentapetalae View MSA
122788906 5272 Eudicot View MSA
122043009 5273 Angiosperm View MSA
121350185 5274 Embryophyte View MSA
123426025 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.60031 0.0 13.2032   High
cufflinks 4.01361 0.0 11.7499    
cufflinks 4.61482 0.0 13.1789   High
cufflinks 3.75569 0.0 11.0323    
cufflinks 3.0153 0.0 9.15537   Low
cufflinks 3.85778 0.0 11.3578    
cufflinks 3.21436 0.0 9.687    
cufflinks 2.94625 0.0 8.96277   Low
cufflinks 2.97585 0.0 9.08087   Low
cufflinks 1.85       Low
cufflinks 4.625        
cufflinks 4.457        
cufflinks 2.239       Low
cufflinks 2.517       Low
cufflinks 4.8        
cufflinks 4.477        
cufflinks 2.6       Low
cufflinks 4.356        
cufflinks 2.975        
cufflinks 5.268       High
cufflinks 4.148        
cufflinks 5.427       High
cufflinks 3.68        
cufflinks 4.189        
cufflinks 4.967        
cufflinks 4.456        

0 Strain