Gene : Glyma.U012700 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR15321 - TUMOR SUPPRESSOR P53-BINDING PROTEIN 1 Genomic Order:  36
Name:  ? Glyma.U012700 Secondary Identifier:  ? PAC:30535325
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U012700 0.5kb upstream 0.5kb upstream 11035 true scaffold_21: 566234-577268 Glycine max
Glyma.U012700 0.5kb upstream 0.5kb upstream 500 false scaffold_21: 566234-566733 Glycine max
Glyma.U012700 0.5kb downstream 0.5kb downstream 11035 true scaffold_21: 566734-577768 Glycine max
Glyma.U012700 0.5kb downstream 0.5kb downstream 500 false scaffold_21: 577269-577768 Glycine max
Glyma.U012700 1.0kb upstream 1.0kb upstream 11535 true scaffold_21: 565734-577268 Glycine max
Glyma.U012700 1.0kb upstream 1.0kb upstream 1000 false scaffold_21: 565734-566733 Glycine max
Glyma.U012700 1.0kb downstream 1.0kb downstream 11535 true scaffold_21: 566734-578268 Glycine max
Glyma.U012700 1.0kb downstream 1.0kb downstream 1000 false scaffold_21: 577269-578268 Glycine max
Glyma.U012700 2.0kb upstream 2.0kb upstream 12535 true scaffold_21: 564734-577268 Glycine max
Glyma.U012700 2.0kb upstream 2.0kb upstream 2000 false scaffold_21: 564734-566733 Glycine max
Glyma.U012700 2.0kb downstream 2.0kb downstream 12535 true scaffold_21: 566734-579268 Glycine max
Glyma.U012700 2.0kb downstream 2.0kb downstream 2000 false scaffold_21: 577269-579268 Glycine max
Glyma.U012700 5.0kb upstream 5.0kb upstream 15535 true scaffold_21: 561734-577268 Glycine max
Glyma.U012700 5.0kb upstream 5.0kb upstream 5000 false scaffold_21: 561734-566733 Glycine max
Glyma.U012700 5.0kb downstream 5.0kb downstream 15535 true scaffold_21: 566734-582268 Glycine max
Glyma.U012700 5.0kb downstream 5.0kb downstream 5000 false scaffold_21: 577269-582268 Glycine max
Glyma.U012700 10.0kb upstream 10.0kb upstream 20535 true scaffold_21: 556734-577268 Glycine max
Glyma.U012700 10.0kb upstream 10.0kb upstream 10000 false scaffold_21: 556734-566733 Glycine max
Glyma.U012700 10.0kb downstream 10.0kb downstream 20535 true scaffold_21: 566734-587268 Glycine max
Glyma.U012700 10.0kb downstream 10.0kb downstream 10000 false scaffold_21: 577269-587268 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306583 5265 Fabidae View MSA
124050896 5270 Rosid View MSA
123750519 5271 Pentapetalae View MSA
122797357 5272 Eudicot View MSA
122048777 5273 Angiosperm View MSA
121349208 5274 Embryophyte View MSA
123381216 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.71643 0.0 2.84397    
cufflinks 1.87769 0.0 7.19913   High
cufflinks 1.13114 0.0 3.85912    
cufflinks 0.86021 0.0 3.15984    
cufflinks 0.84636 0.0 3.20539    
cufflinks 0.646134 0.0 2.60219   Low
cufflinks 0.924175 0.0 3.39174    
cufflinks 0.80758 0.0 3.02477    
cufflinks 1.23768 0.0 4.19461    
cufflinks 0.134        
cufflinks 0.111       Low
cufflinks 0.267        
cufflinks 0.286        
cufflinks 0.294        
cufflinks 0.177        
cufflinks 0.177        
cufflinks 0.152        
cufflinks 0.277        
cufflinks 0.493       High
cufflinks 0.121       Low
cufflinks 0.124        
cufflinks 0.168        
cufflinks 0.337       High
cufflinks 0.129        
cufflinks 0.187        
cufflinks 0.13        

0 Strain