Gene : Glyma.20G249200 G. max Wm82.a2.v1
Genomic Order:  2492 Name:  ? Glyma.20G249200
Secondary Identifier:  ? PAC:30522679
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G249200 0.5kb upstream 0.5kb upstream 2905 true Chr20: 47807974-47810878 Glycine max
Glyma.20G249200 0.5kb upstream 0.5kb upstream 500 false Chr20: 47810379-47810878 Glycine max
Glyma.20G249200 0.5kb downstream 0.5kb downstream 2905 true Chr20: 47807474-47810378 Glycine max
Glyma.20G249200 0.5kb downstream 0.5kb downstream 500 false Chr20: 47807474-47807973 Glycine max
Glyma.20G249200 1.0kb upstream 1.0kb upstream 3405 true Chr20: 47807974-47811378 Glycine max
Glyma.20G249200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 47810379-47811378 Glycine max
Glyma.20G249200 1.0kb downstream 1.0kb downstream 3405 true Chr20: 47806974-47810378 Glycine max
Glyma.20G249200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 47806974-47807973 Glycine max
Glyma.20G249200 2.0kb upstream 2.0kb upstream 4405 true Chr20: 47807974-47812378 Glycine max
Glyma.20G249200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 47810379-47812378 Glycine max
Glyma.20G249200 2.0kb downstream 2.0kb downstream 4405 true Chr20: 47805974-47810378 Glycine max
Glyma.20G249200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 47805974-47807973 Glycine max
Glyma.20G249200 5.0kb upstream 5.0kb upstream 7405 true Chr20: 47807974-47815378 Glycine max
Glyma.20G249200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 47810379-47815378 Glycine max
Glyma.20G249200 5.0kb downstream 5.0kb downstream 7405 true Chr20: 47802974-47810378 Glycine max
Glyma.20G249200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 47802974-47807973 Glycine max
Glyma.20G249200 10.0kb upstream 10.0kb upstream 12405 true Chr20: 47807974-47820378 Glycine max
Glyma.20G249200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 47810379-47820378 Glycine max
Glyma.20G249200 10.0kb downstream 10.0kb downstream 12405 true Chr20: 47797974-47810378 Glycine max
Glyma.20G249200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 47797974-47807973 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040977 5273 Angiosperm View MSA
122309417 5265 Fabidae View MSA
124070978 5270 Rosid View MSA
123741365 5271 Pentapetalae View MSA
122790161 5272 Eudicot View MSA
121309780 5274 Embryophyte View MSA
123347441 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0230198 0.0 0.0980986 Low  
cufflinks 0.180462 0.0 0.696897 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0122895 0.0 0.0551461 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.54721 0.0 18.2439   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 11.51     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.281        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low  
cufflinks 0.006     Low Low
cufflinks 0.06     Low  
cufflinks 0.009     Low  
cufflinks 0.084     Low  
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.219        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain