Gene : Glyma.20G249800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR36716:SF2 - F3H9.20 PROTEIN Genomic Order:  2498
Name:  ? Glyma.20G249800 Secondary Identifier:  ? PAC:30520421
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G249800 0.5kb upstream 0.5kb upstream 2222 true Chr20: 47843311-47845532 Glycine max
Glyma.20G249800 0.5kb upstream 0.5kb upstream 500 false Chr20: 47845033-47845532 Glycine max
Glyma.20G249800 0.5kb downstream 0.5kb downstream 2222 true Chr20: 47842811-47845032 Glycine max
Glyma.20G249800 0.5kb downstream 0.5kb downstream 500 false Chr20: 47842811-47843310 Glycine max
Glyma.20G249800 1.0kb upstream 1.0kb upstream 2722 true Chr20: 47843311-47846032 Glycine max
Glyma.20G249800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 47845033-47846032 Glycine max
Glyma.20G249800 1.0kb downstream 1.0kb downstream 2722 true Chr20: 47842311-47845032 Glycine max
Glyma.20G249800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 47842311-47843310 Glycine max
Glyma.20G249800 2.0kb upstream 2.0kb upstream 3722 true Chr20: 47843311-47847032 Glycine max
Glyma.20G249800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 47845033-47847032 Glycine max
Glyma.20G249800 2.0kb downstream 2.0kb downstream 3722 true Chr20: 47841311-47845032 Glycine max
Glyma.20G249800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 47841311-47843310 Glycine max
Glyma.20G249800 5.0kb upstream 5.0kb upstream 6722 true Chr20: 47843311-47850032 Glycine max
Glyma.20G249800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 47845033-47850032 Glycine max
Glyma.20G249800 5.0kb downstream 5.0kb downstream 6722 true Chr20: 47838311-47845032 Glycine max
Glyma.20G249800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 47838311-47843310 Glycine max
Glyma.20G249800 10.0kb upstream 10.0kb upstream 11722 true Chr20: 47843311-47855032 Glycine max
Glyma.20G249800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 47845033-47855032 Glycine max
Glyma.20G249800 10.0kb downstream 10.0kb downstream 11722 true Chr20: 47833311-47845032 Glycine max
Glyma.20G249800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 47833311-47843310 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303476 5265 Fabidae View MSA
124066524 5270 Rosid View MSA
123738550 5271 Pentapetalae View MSA
122793867 5272 Eudicot View MSA
122042294 5273 Angiosperm View MSA
121344555 5274 Embryophyte View MSA
123424040 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 98.2685 0.0 406.195 High High
cufflinks 25.4799 0.0 94.4132 High  
cufflinks 63.4751 0.0 262.214 High High
cufflinks 32.5236 0.0 121.328 High  
cufflinks 10.2246 0.0 43.1096   Low
cufflinks 9.89616 0.0 41.0853   Low
cufflinks 19.1162 0.0 71.7351    
cufflinks 37.0379 0.0 139.618 High  
cufflinks 9.95415 0.0 41.0555   Low
cufflinks 2.319        
cufflinks 3.325        
cufflinks 11.275     High High
cufflinks 0.955       Low
cufflinks 0.923       Low
cufflinks 1.222       Low
cufflinks 8.274     High  
cufflinks 2.009        
cufflinks 8.412     High  
cufflinks 4.451        
cufflinks 15.604     High High
cufflinks 2.944        
cufflinks 13.914     High High
cufflinks 9.3     High  
cufflinks 4.462        
cufflinks 11.992     High High
cufflinks 1.695        

0 Strain