Gene : Glyma.20G244000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11909:SF146 - CASEIN KINASE-LIKE PROTEIN Genomic Order:  2440
Name:  ? Glyma.20G244000 Secondary Identifier:  ? PAC:30520196
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G244000 0.5kb upstream 0.5kb upstream 5943 true Chr20: 47427114-47433056 Glycine max
Glyma.20G244000 0.5kb upstream 0.5kb upstream 500 false Chr20: 47427114-47427613 Glycine max
Glyma.20G244000 0.5kb downstream 0.5kb downstream 5943 true Chr20: 47427614-47433556 Glycine max
Glyma.20G244000 0.5kb downstream 0.5kb downstream 500 false Chr20: 47433057-47433556 Glycine max
Glyma.20G244000 1.0kb upstream 1.0kb upstream 6443 true Chr20: 47426614-47433056 Glycine max
Glyma.20G244000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 47426614-47427613 Glycine max
Glyma.20G244000 1.0kb downstream 1.0kb downstream 6443 true Chr20: 47427614-47434056 Glycine max
Glyma.20G244000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 47433057-47434056 Glycine max
Glyma.20G244000 2.0kb upstream 2.0kb upstream 7443 true Chr20: 47425614-47433056 Glycine max
Glyma.20G244000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 47425614-47427613 Glycine max
Glyma.20G244000 2.0kb downstream 2.0kb downstream 7443 true Chr20: 47427614-47435056 Glycine max
Glyma.20G244000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 47433057-47435056 Glycine max
Glyma.20G244000 5.0kb upstream 5.0kb upstream 10443 true Chr20: 47422614-47433056 Glycine max
Glyma.20G244000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 47422614-47427613 Glycine max
Glyma.20G244000 5.0kb downstream 5.0kb downstream 10443 true Chr20: 47427614-47438056 Glycine max
Glyma.20G244000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 47433057-47438056 Glycine max
Glyma.20G244000 10.0kb upstream 10.0kb upstream 15443 true Chr20: 47417614-47433056 Glycine max
Glyma.20G244000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 47417614-47427613 Glycine max
Glyma.20G244000 10.0kb downstream 10.0kb downstream 15443 true Chr20: 47427614-47443056 Glycine max
Glyma.20G244000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 47433057-47443056 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297994 5265 Fabidae View MSA
124060485 5270 Rosid View MSA
123746473 5271 Pentapetalae View MSA
122796123 5272 Eudicot View MSA
122047943 5273 Angiosperm View MSA
121348190 5274 Embryophyte View MSA
123427857 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.2886 0.0 57.962    
cufflinks 12.511 0.0 33.3865   Low
cufflinks 26.9796 0.0 74.9696 High High
cufflinks 17.0216 0.0 45.7894    
cufflinks 18.2937 0.0 49.3742    
cufflinks 14.4541 0.0 38.6767    
cufflinks 19.1749 0.0 51.8659    
cufflinks 18.9316 0.0 51.1674    
cufflinks 16.6476 0.0 44.7311    
cufflinks 9.964     High Low
cufflinks 12.046     High  
cufflinks 13.812     High High
cufflinks 11.704     High  
cufflinks 12.496     High  
cufflinks 10.386     High  
cufflinks 11.007     High  
cufflinks 8.256     High Low
cufflinks 12.218     High  
cufflinks 11.033     High  
cufflinks 11.83     High  
cufflinks 11.23     High  
cufflinks 11.997     High  
cufflinks 9.573     High Low
cufflinks 14.835     High High
cufflinks 11.693     High  
cufflinks 11.667     High  

0 Strain