Gene : Glyma.20G247200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR16140:SF0 - PROTEIN H21P03.2 Genomic Order:  2472
Name:  ? Glyma.20G247200 Secondary Identifier:  ? PAC:30521804
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G247200 0.5kb upstream 0.5kb upstream 2875 true Chr20: 47682130-47685004 Glycine max
Glyma.20G247200 0.5kb upstream 0.5kb upstream 500 false Chr20: 47684505-47685004 Glycine max
Glyma.20G247200 0.5kb downstream 0.5kb downstream 2875 true Chr20: 47681630-47684504 Glycine max
Glyma.20G247200 0.5kb downstream 0.5kb downstream 500 false Chr20: 47681630-47682129 Glycine max
Glyma.20G247200 1.0kb upstream 1.0kb upstream 3375 true Chr20: 47682130-47685504 Glycine max
Glyma.20G247200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 47684505-47685504 Glycine max
Glyma.20G247200 1.0kb downstream 1.0kb downstream 3375 true Chr20: 47681130-47684504 Glycine max
Glyma.20G247200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 47681130-47682129 Glycine max
Glyma.20G247200 2.0kb upstream 2.0kb upstream 4375 true Chr20: 47682130-47686504 Glycine max
Glyma.20G247200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 47684505-47686504 Glycine max
Glyma.20G247200 2.0kb downstream 2.0kb downstream 4375 true Chr20: 47680130-47684504 Glycine max
Glyma.20G247200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 47680130-47682129 Glycine max
Glyma.20G247200 5.0kb upstream 5.0kb upstream 7375 true Chr20: 47682130-47689504 Glycine max
Glyma.20G247200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 47684505-47689504 Glycine max
Glyma.20G247200 5.0kb downstream 5.0kb downstream 7375 true Chr20: 47677130-47684504 Glycine max
Glyma.20G247200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 47677130-47682129 Glycine max
Glyma.20G247200 10.0kb upstream 10.0kb upstream 12375 true Chr20: 47682130-47694504 Glycine max
Glyma.20G247200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 47684505-47694504 Glycine max
Glyma.20G247200 10.0kb downstream 10.0kb downstream 12375 true Chr20: 47672130-47684504 Glycine max
Glyma.20G247200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 47672130-47682129 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300451 5265 Fabidae View MSA
124070075 5270 Rosid View MSA
123747962 5271 Pentapetalae View MSA
122793690 5272 Eudicot View MSA
122042819 5273 Angiosperm View MSA
121349826 5274 Embryophyte View MSA
123428670 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.09735 0.0 20.1557    
cufflinks 12.775 0.0 34.5739    
cufflinks 8.31217 0.0 23.2346    
cufflinks 11.1388 0.0 30.3668    
cufflinks 9.56097 0.0 26.3413    
cufflinks 6.22678 0.0 17.9358   Low
cufflinks 22.4414 0.0 59.8763 High High
cufflinks 7.89103 0.0 22.1293    
cufflinks 11.3658 0.0 30.9447    
cufflinks 2.452       Low
cufflinks 5.256        
cufflinks 4.519        
cufflinks 3.737        
cufflinks 4.81        
cufflinks 4.982        
cufflinks 5.244        
cufflinks 3.639       Low
cufflinks 4.151        
cufflinks 7.931     High High
cufflinks 5.458        
cufflinks 5.0        
cufflinks 5.605        
cufflinks 5.471        
cufflinks 6.005        
cufflinks 5.452        
cufflinks 4.381        

0 Strain