Gene : Glyma.20G247600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR14233//PTHR14233:SF14 - DUF914-RELATED Genomic Order:  2476
Name:  ? Glyma.20G247600 Secondary Identifier:  ? PAC:30520083
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G247600 0.5kb upstream 0.5kb upstream 2696 true Chr20: 47702048-47704743 Glycine max
Glyma.20G247600 0.5kb upstream 0.5kb upstream 500 false Chr20: 47702048-47702547 Glycine max
Glyma.20G247600 0.5kb downstream 0.5kb downstream 2696 true Chr20: 47702548-47705243 Glycine max
Glyma.20G247600 0.5kb downstream 0.5kb downstream 500 false Chr20: 47704744-47705243 Glycine max
Glyma.20G247600 1.0kb upstream 1.0kb upstream 3196 true Chr20: 47701548-47704743 Glycine max
Glyma.20G247600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 47701548-47702547 Glycine max
Glyma.20G247600 1.0kb downstream 1.0kb downstream 3196 true Chr20: 47702548-47705743 Glycine max
Glyma.20G247600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 47704744-47705743 Glycine max
Glyma.20G247600 2.0kb upstream 2.0kb upstream 4196 true Chr20: 47700548-47704743 Glycine max
Glyma.20G247600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 47700548-47702547 Glycine max
Glyma.20G247600 2.0kb downstream 2.0kb downstream 4196 true Chr20: 47702548-47706743 Glycine max
Glyma.20G247600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 47704744-47706743 Glycine max
Glyma.20G247600 5.0kb upstream 5.0kb upstream 7196 true Chr20: 47697548-47704743 Glycine max
Glyma.20G247600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 47697548-47702547 Glycine max
Glyma.20G247600 5.0kb downstream 5.0kb downstream 7196 true Chr20: 47702548-47709743 Glycine max
Glyma.20G247600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 47704744-47709743 Glycine max
Glyma.20G247600 10.0kb upstream 10.0kb upstream 12196 true Chr20: 47692548-47704743 Glycine max
Glyma.20G247600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 47692548-47702547 Glycine max
Glyma.20G247600 10.0kb downstream 10.0kb downstream 12196 true Chr20: 47702548-47714743 Glycine max
Glyma.20G247600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 47704744-47714743 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122238311 5265 Fabidae Singleton cluster - no MSA
123983756 5270 Rosid Singleton cluster - no MSA
123750436 5271 Pentapetalae View MSA
122794393 5272 Eudicot View MSA
122043877 5273 Angiosperm View MSA
121345871 5274 Embryophyte View MSA
123426042 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0739564 0.0 0.334469 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0705252 0.0 0.319194 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.144       High
cufflinks 0.018     Low  
cufflinks 0.014     Low Low
cufflinks 0.023     Low  
cufflinks 0.042     Low  
cufflinks 0.009     Low Low
cufflinks 0.09     Low  
cufflinks 0.054     Low  
cufflinks 0.041     Low  
cufflinks 0.095     Low  
cufflinks 0.13       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.097        
cufflinks 0.115        
cufflinks 0.016     Low  
cufflinks 0.1        
cufflinks 0.007     Low Low

0 Strain