Gene : Glyma.U030800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24206:SF35 - TRANSCRIPTION FACTOR-RELATED Genomic Order:  23
Name:  ? Glyma.U030800 Secondary Identifier:  ? PAC:30523567
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U030800 0.5kb upstream 0.5kb upstream 2620 true scaffold_28: 306717-309336 Glycine max
Glyma.U030800 0.5kb upstream 0.5kb upstream 500 false scaffold_28: 308837-309336 Glycine max
Glyma.U030800 0.5kb downstream 0.5kb downstream 2620 true scaffold_28: 306217-308836 Glycine max
Glyma.U030800 0.5kb downstream 0.5kb downstream 500 false scaffold_28: 306217-306716 Glycine max
Glyma.U030800 1.0kb upstream 1.0kb upstream 3120 true scaffold_28: 306717-309836 Glycine max
Glyma.U030800 1.0kb upstream 1.0kb upstream 1000 false scaffold_28: 308837-309836 Glycine max
Glyma.U030800 1.0kb downstream 1.0kb downstream 3120 true scaffold_28: 305717-308836 Glycine max
Glyma.U030800 1.0kb downstream 1.0kb downstream 1000 false scaffold_28: 305717-306716 Glycine max
Glyma.U030800 2.0kb upstream 2.0kb upstream 4120 true scaffold_28: 306717-310836 Glycine max
Glyma.U030800 2.0kb upstream 2.0kb upstream 2000 false scaffold_28: 308837-310836 Glycine max
Glyma.U030800 2.0kb downstream 2.0kb downstream 4120 true scaffold_28: 304717-308836 Glycine max
Glyma.U030800 2.0kb downstream 2.0kb downstream 2000 false scaffold_28: 304717-306716 Glycine max
Glyma.U030800 5.0kb upstream 5.0kb upstream 7120 true scaffold_28: 306717-313836 Glycine max
Glyma.U030800 5.0kb upstream 5.0kb upstream 5000 false scaffold_28: 308837-313836 Glycine max
Glyma.U030800 5.0kb downstream 5.0kb downstream 7120 true scaffold_28: 301717-308836 Glycine max
Glyma.U030800 5.0kb downstream 5.0kb downstream 5000 false scaffold_28: 301717-306716 Glycine max
Glyma.U030800 10.0kb upstream 10.0kb upstream 12120 true scaffold_28: 306717-318836 Glycine max
Glyma.U030800 10.0kb upstream 10.0kb upstream 10000 false scaffold_28: 308837-318836 Glycine max
Glyma.U030800 10.0kb downstream 10.0kb downstream 12120 true scaffold_28: 296717-308836 Glycine max
Glyma.U030800 10.0kb downstream 10.0kb downstream 10000 false scaffold_28: 296717-306716 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309325 5265 Fabidae View MSA
124066867 5270 Rosid View MSA
123744734 5271 Pentapetalae View MSA
122789493 5272 Eudicot View MSA
122049992 5273 Angiosperm View MSA
121348284 5274 Embryophyte View MSA
123426269 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.424906 0.0 1.6098   Low
cufflinks 23.9075 0.0 63.8008 High  
cufflinks 3.48619 0.0 11.1309    
cufflinks 26.5564 0.0 70.8569 High  
cufflinks 7.53015 0.0 21.67    
cufflinks 5.9932 0.0 17.7373    
cufflinks 2.95012 0.0 9.67009    
cufflinks 63.33 0.0 176.862 High High
cufflinks 6.73836 0.0 19.637    
cufflinks 39.967     High High
cufflinks 0.344        
cufflinks 4.376        
cufflinks 5.365        
cufflinks 5.31        
cufflinks 0.072       Low
cufflinks 1.984        
cufflinks 2.564        
cufflinks 3.261        
cufflinks 17.514     High High
cufflinks 0.777        
cufflinks 0.498        
cufflinks 0.992        
cufflinks 1.142        
cufflinks 0.102       Low
cufflinks 1.1        
cufflinks 0.591        

0 Strain