Gene : Glyma.U034000 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR19376:SF32 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1 Genomic Order:  11
Name:  ? Glyma.U034000 Secondary Identifier:  ? PAC:30523537
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U034000 0.5kb upstream 0.5kb upstream 29881 true scaffold_32: 140223-170103 Glycine max
Glyma.U034000 0.5kb upstream 0.5kb upstream 500 false scaffold_32: 140223-140722 Glycine max
Glyma.U034000 0.5kb downstream 0.5kb downstream 29881 true scaffold_32: 140723-170603 Glycine max
Glyma.U034000 0.5kb downstream 0.5kb downstream 500 false scaffold_32: 170104-170603 Glycine max
Glyma.U034000 1.0kb upstream 1.0kb upstream 30381 true scaffold_32: 139723-170103 Glycine max
Glyma.U034000 1.0kb upstream 1.0kb upstream 1000 false scaffold_32: 139723-140722 Glycine max
Glyma.U034000 1.0kb downstream 1.0kb downstream 30381 true scaffold_32: 140723-171103 Glycine max
Glyma.U034000 1.0kb downstream 1.0kb downstream 1000 false scaffold_32: 170104-171103 Glycine max
Glyma.U034000 2.0kb upstream 2.0kb upstream 31381 true scaffold_32: 138723-170103 Glycine max
Glyma.U034000 2.0kb upstream 2.0kb upstream 2000 false scaffold_32: 138723-140722 Glycine max
Glyma.U034000 2.0kb downstream 2.0kb downstream 31381 true scaffold_32: 140723-172103 Glycine max
Glyma.U034000 2.0kb downstream 2.0kb downstream 2000 false scaffold_32: 170104-172103 Glycine max
Glyma.U034000 5.0kb upstream 5.0kb upstream 34381 true scaffold_32: 135723-170103 Glycine max
Glyma.U034000 5.0kb upstream 5.0kb upstream 5000 false scaffold_32: 135723-140722 Glycine max
Glyma.U034000 5.0kb downstream 5.0kb downstream 34381 true scaffold_32: 140723-175103 Glycine max
Glyma.U034000 5.0kb downstream 5.0kb downstream 5000 false scaffold_32: 170104-175103 Glycine max
Glyma.U034000 10.0kb upstream 10.0kb upstream 39381 true scaffold_32: 130723-170103 Glycine max
Glyma.U034000 10.0kb upstream 10.0kb upstream 10000 false scaffold_32: 130723-140722 Glycine max
Glyma.U034000 10.0kb downstream 10.0kb downstream 39381 true scaffold_32: 140723-180103 Glycine max
Glyma.U034000 10.0kb downstream 10.0kb downstream 10000 false scaffold_32: 170104-180103 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041213 5273 Angiosperm View MSA
122298997 5265 Fabidae View MSA
124067709 5270 Rosid View MSA
123749411 5271 Pentapetalae View MSA
122792408 5272 Eudicot View MSA
121346672 5274 Embryophyte View MSA
123424215 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.18372 0.0 21.9154    
cufflinks 6.82498 0.0 18.2164    
cufflinks 7.62654 0.0 20.4072    
cufflinks 8.58879 0.0 23.0487    
cufflinks 8.15926 0.0 21.8423    
cufflinks 3.88079 0.0 10.4717   Low
cufflinks 13.4736 0.0 37.0419   High
cufflinks 4.84239 0.0 12.962   Low
cufflinks 7.77013 0.0 20.7817    
cufflinks 0.946       Low
cufflinks 0.994       Low
cufflinks 1.946       High
cufflinks 1.648        
cufflinks 1.992       High
cufflinks 1.368        
cufflinks 1.549        
cufflinks 0.93       Low
cufflinks 1.871       High
cufflinks 1.847       High
cufflinks 1.444        
cufflinks 1.08        
cufflinks 1.569        
cufflinks 1.262        
cufflinks 1.168        
cufflinks 1.413        
cufflinks 1.066        

0 Strain