Gene : Glyma.U028700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31602:SF2 - GROWTH-REGULATING FACTOR 1-RELATED Genomic Order:  2
Name:  ? Glyma.U028700 Secondary Identifier:  ? PAC:30523543
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U028700 0.5kb upstream 0.5kb upstream 4727 true scaffold_28: 55402-60128 Glycine max
Glyma.U028700 0.5kb upstream 0.5kb upstream 500 false scaffold_28: 55402-55901 Glycine max
Glyma.U028700 0.5kb downstream 0.5kb downstream 4727 true scaffold_28: 55902-60628 Glycine max
Glyma.U028700 0.5kb downstream 0.5kb downstream 500 false scaffold_28: 60129-60628 Glycine max
Glyma.U028700 1.0kb upstream 1.0kb upstream 5227 true scaffold_28: 54902-60128 Glycine max
Glyma.U028700 1.0kb upstream 1.0kb upstream 1000 false scaffold_28: 54902-55901 Glycine max
Glyma.U028700 1.0kb downstream 1.0kb downstream 5227 true scaffold_28: 55902-61128 Glycine max
Glyma.U028700 1.0kb downstream 1.0kb downstream 1000 false scaffold_28: 60129-61128 Glycine max
Glyma.U028700 2.0kb upstream 2.0kb upstream 6227 true scaffold_28: 53902-60128 Glycine max
Glyma.U028700 2.0kb upstream 2.0kb upstream 2000 false scaffold_28: 53902-55901 Glycine max
Glyma.U028700 2.0kb downstream 2.0kb downstream 6227 true scaffold_28: 55902-62128 Glycine max
Glyma.U028700 2.0kb downstream 2.0kb downstream 2000 false scaffold_28: 60129-62128 Glycine max
Glyma.U028700 5.0kb upstream 5.0kb upstream 9227 true scaffold_28: 50902-60128 Glycine max
Glyma.U028700 5.0kb upstream 5.0kb upstream 5000 false scaffold_28: 50902-55901 Glycine max
Glyma.U028700 5.0kb downstream 5.0kb downstream 9227 true scaffold_28: 55902-65128 Glycine max
Glyma.U028700 5.0kb downstream 5.0kb downstream 5000 false scaffold_28: 60129-65128 Glycine max
Glyma.U028700 10.0kb upstream 10.0kb upstream 14227 true scaffold_28: 45902-60128 Glycine max
Glyma.U028700 10.0kb upstream 10.0kb upstream 10000 false scaffold_28: 45902-55901 Glycine max
Glyma.U028700 10.0kb downstream 10.0kb downstream 14227 true scaffold_28: 55902-70128 Glycine max
Glyma.U028700 10.0kb downstream 10.0kb downstream 10000 false scaffold_28: 60129-70128 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305476 5265 Fabidae View MSA
124070483 5270 Rosid View MSA
123751333 5271 Pentapetalae View MSA
122792391 5272 Eudicot View MSA
122044407 5273 Angiosperm View MSA
121349095 5274 Embryophyte View MSA
123381164 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.46992 0.0 10.111    
cufflinks 26.3052 0.0 72.0141 High High
cufflinks 5.74672 0.0 15.8483    
cufflinks 2.89218 0.0 8.61114   Low
cufflinks 19.7964 0.0 53.3083   High
cufflinks 8.53011 0.0 22.9751    
cufflinks 19.2472 0.0 51.7903   High
cufflinks 2.30005 0.0 7.04682   Low
cufflinks 6.06721 0.0 16.6558    
cufflinks 1.891       Low
cufflinks 4.944        
cufflinks 4.105        
cufflinks 15.927     High  
cufflinks 23.436     High High
cufflinks 1.879       Low
cufflinks 13.952     High  
cufflinks 2.344       Low
cufflinks 2.185       Low
cufflinks 22.079     High High
cufflinks 10.629     High  
cufflinks 5.921     High  
cufflinks 11.85     High  
cufflinks 12.313     High  
cufflinks 5.781        
cufflinks 9.502     High  
cufflinks 9.476     High  

0 Strain