Gene : Glyma.U021800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24055:SF214 - MITOGEN-ACTIVATED PROTEIN KINASE 3 Genomic Order:  127
Name:  ? Glyma.U021800 Secondary Identifier:  ? PAC:30535268
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U021800 0.5kb upstream 0.5kb upstream 3959 true scaffold_21: 3501255-3505213 Glycine max
Glyma.U021800 0.5kb upstream 0.5kb upstream 500 false scaffold_21: 3504714-3505213 Glycine max
Glyma.U021800 0.5kb downstream 0.5kb downstream 3959 true scaffold_21: 3500755-3504713 Glycine max
Glyma.U021800 0.5kb downstream 0.5kb downstream 500 false scaffold_21: 3500755-3501254 Glycine max
Glyma.U021800 1.0kb upstream 1.0kb upstream 4459 true scaffold_21: 3501255-3505713 Glycine max
Glyma.U021800 1.0kb upstream 1.0kb upstream 1000 false scaffold_21: 3504714-3505713 Glycine max
Glyma.U021800 1.0kb downstream 1.0kb downstream 4459 true scaffold_21: 3500255-3504713 Glycine max
Glyma.U021800 1.0kb downstream 1.0kb downstream 1000 false scaffold_21: 3500255-3501254 Glycine max
Glyma.U021800 2.0kb upstream 2.0kb upstream 5459 true scaffold_21: 3501255-3506713 Glycine max
Glyma.U021800 2.0kb upstream 2.0kb upstream 2000 false scaffold_21: 3504714-3506713 Glycine max
Glyma.U021800 2.0kb downstream 2.0kb downstream 5459 true scaffold_21: 3499255-3504713 Glycine max
Glyma.U021800 2.0kb downstream 2.0kb downstream 2000 false scaffold_21: 3499255-3501254 Glycine max
Glyma.U021800 5.0kb upstream 5.0kb upstream 8459 true scaffold_21: 3501255-3509713 Glycine max
Glyma.U021800 5.0kb upstream 5.0kb upstream 5000 false scaffold_21: 3504714-3509713 Glycine max
Glyma.U021800 5.0kb downstream 5.0kb downstream 8459 true scaffold_21: 3496255-3504713 Glycine max
Glyma.U021800 5.0kb downstream 5.0kb downstream 5000 false scaffold_21: 3496255-3501254 Glycine max
Glyma.U021800 10.0kb upstream 10.0kb upstream 13459 true scaffold_21: 3501255-3514713 Glycine max
Glyma.U021800 10.0kb upstream 10.0kb upstream 10000 false scaffold_21: 3504714-3514713 Glycine max
Glyma.U021800 10.0kb downstream 10.0kb downstream 13459 true scaffold_21: 3491255-3504713 Glycine max
Glyma.U021800 10.0kb downstream 10.0kb downstream 10000 false scaffold_21: 3491255-3501254 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307140 5265 Fabidae View MSA
124066490 5270 Rosid View MSA
123739080 5271 Pentapetalae View MSA
122791748 5272 Eudicot View MSA
122050420 5273 Angiosperm View MSA
121352575 5274 Embryophyte View MSA
123428294 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 64.2565 0.0 301.22 High High
cufflinks 3.35206 0.0 10.253    
cufflinks 14.7836 0.0 57.8032    
cufflinks 2.64163 0.0 12.4533   Low
cufflinks 22.5394 0.0 86.785 High  
cufflinks 54.9676 0.0 247.114 High High
cufflinks 1.90391 0.0 6.92569   Low
cufflinks 8.15736 0.0 30.8001    
cufflinks 17.8564 0.0 68.6346    
cufflinks 26.853     High High
cufflinks 30.905     High High
cufflinks 6.111        
cufflinks 11.96     High  
cufflinks 2.527       Low
cufflinks 19.979     High  
cufflinks 5.011        
cufflinks 50.858     High High
cufflinks 4.745        
cufflinks 2.381       Low
cufflinks 2.484       Low
cufflinks 14.275     High  
cufflinks 3.197       Low
cufflinks 10.305     High  
cufflinks 29.036     High High
cufflinks 3.636        
cufflinks 25.02     High  

0 Strain