Gene : Glyma.U020300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31189:SF2 - CUPIN DOMAIN-CONTAINING PROTEIN Genomic Order:  112
Name:  ? Glyma.U020300 Secondary Identifier:  ? PAC:30535437
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U020300 0.5kb upstream 0.5kb upstream 4131 true scaffold_21: 3340396-3344526 Glycine max
Glyma.U020300 0.5kb upstream 0.5kb upstream 500 false scaffold_21: 3344027-3344526 Glycine max
Glyma.U020300 0.5kb downstream 0.5kb downstream 4131 true scaffold_21: 3339896-3344026 Glycine max
Glyma.U020300 0.5kb downstream 0.5kb downstream 500 false scaffold_21: 3339896-3340395 Glycine max
Glyma.U020300 1.0kb upstream 1.0kb upstream 4631 true scaffold_21: 3340396-3345026 Glycine max
Glyma.U020300 1.0kb upstream 1.0kb upstream 1000 false scaffold_21: 3344027-3345026 Glycine max
Glyma.U020300 1.0kb downstream 1.0kb downstream 4631 true scaffold_21: 3339396-3344026 Glycine max
Glyma.U020300 1.0kb downstream 1.0kb downstream 1000 false scaffold_21: 3339396-3340395 Glycine max
Glyma.U020300 2.0kb upstream 2.0kb upstream 5631 true scaffold_21: 3340396-3346026 Glycine max
Glyma.U020300 2.0kb upstream 2.0kb upstream 2000 false scaffold_21: 3344027-3346026 Glycine max
Glyma.U020300 2.0kb downstream 2.0kb downstream 5631 true scaffold_21: 3338396-3344026 Glycine max
Glyma.U020300 2.0kb downstream 2.0kb downstream 2000 false scaffold_21: 3338396-3340395 Glycine max
Glyma.U020300 5.0kb upstream 5.0kb upstream 8631 true scaffold_21: 3340396-3349026 Glycine max
Glyma.U020300 5.0kb upstream 5.0kb upstream 5000 false scaffold_21: 3344027-3349026 Glycine max
Glyma.U020300 5.0kb downstream 5.0kb downstream 8631 true scaffold_21: 3335396-3344026 Glycine max
Glyma.U020300 5.0kb downstream 5.0kb downstream 5000 false scaffold_21: 3335396-3340395 Glycine max
Glyma.U020300 10.0kb upstream 10.0kb upstream 13631 true scaffold_21: 3340396-3354026 Glycine max
Glyma.U020300 10.0kb upstream 10.0kb upstream 10000 false scaffold_21: 3344027-3354026 Glycine max
Glyma.U020300 10.0kb downstream 10.0kb downstream 13631 true scaffold_21: 3330396-3344026 Glycine max
Glyma.U020300 10.0kb downstream 10.0kb downstream 10000 false scaffold_21: 3330396-3340395 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313919 5265 Fabidae View MSA
124068702 5270 Rosid View MSA
123752379 5271 Pentapetalae View MSA
122792319 5272 Eudicot View MSA
122046827 5273 Angiosperm View MSA
121310665 5274 Embryophyte View MSA
123348093 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0104727 0.0 0.0473631 Low  
cufflinks 0.0410164 0.0 0.167338 Low  
cufflinks 0.279704 0.0 1.05375    
cufflinks 0.448858 0.0 1.65289    
cufflinks 0.213101 0.0 0.813178 Low  
cufflinks 1.2594 0.0 4.30215    
cufflinks 1713.37 0.0 16974.0 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0104961 0.0 0.0474739 Low  
cufflinks 0.142        
cufflinks 0.02     Low  
cufflinks 2.359       High
cufflinks 0.117        
cufflinks 0.676       High
cufflinks 0.037     Low  
cufflinks 0.032     Low  
cufflinks 0.121        
cufflinks 8.261     High High
cufflinks 0.04     Low  
cufflinks 0.009     Low Low
cufflinks 0.018     Low  
cufflinks 0.018     Low  
cufflinks 0.06     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.013     Low  

0 Strain