Gene : Glyma.U020900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31301:SF14 - LOB DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  118
Name:  ? Glyma.U020900 Secondary Identifier:  ? PAC:30535352
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U020900 0.5kb upstream 0.5kb upstream 2965 true scaffold_21: 3406020-3408984 Glycine max
Glyma.U020900 0.5kb upstream 0.5kb upstream 500 false scaffold_21: 3408485-3408984 Glycine max
Glyma.U020900 0.5kb downstream 0.5kb downstream 2965 true scaffold_21: 3405520-3408484 Glycine max
Glyma.U020900 0.5kb downstream 0.5kb downstream 500 false scaffold_21: 3405520-3406019 Glycine max
Glyma.U020900 1.0kb upstream 1.0kb upstream 3465 true scaffold_21: 3406020-3409484 Glycine max
Glyma.U020900 1.0kb upstream 1.0kb upstream 1000 false scaffold_21: 3408485-3409484 Glycine max
Glyma.U020900 1.0kb downstream 1.0kb downstream 3465 true scaffold_21: 3405020-3408484 Glycine max
Glyma.U020900 1.0kb downstream 1.0kb downstream 1000 false scaffold_21: 3405020-3406019 Glycine max
Glyma.U020900 2.0kb upstream 2.0kb upstream 4465 true scaffold_21: 3406020-3410484 Glycine max
Glyma.U020900 2.0kb upstream 2.0kb upstream 2000 false scaffold_21: 3408485-3410484 Glycine max
Glyma.U020900 2.0kb downstream 2.0kb downstream 4465 true scaffold_21: 3404020-3408484 Glycine max
Glyma.U020900 2.0kb downstream 2.0kb downstream 2000 false scaffold_21: 3404020-3406019 Glycine max
Glyma.U020900 5.0kb upstream 5.0kb upstream 7465 true scaffold_21: 3406020-3413484 Glycine max
Glyma.U020900 5.0kb upstream 5.0kb upstream 5000 false scaffold_21: 3408485-3413484 Glycine max
Glyma.U020900 5.0kb downstream 5.0kb downstream 7465 true scaffold_21: 3401020-3408484 Glycine max
Glyma.U020900 5.0kb downstream 5.0kb downstream 5000 false scaffold_21: 3401020-3406019 Glycine max
Glyma.U020900 10.0kb upstream 10.0kb upstream 12465 true scaffold_21: 3406020-3418484 Glycine max
Glyma.U020900 10.0kb upstream 10.0kb upstream 10000 false scaffold_21: 3408485-3418484 Glycine max
Glyma.U020900 10.0kb downstream 10.0kb downstream 12465 true scaffold_21: 3396020-3408484 Glycine max
Glyma.U020900 10.0kb downstream 10.0kb downstream 10000 false scaffold_21: 3396020-3406019 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301117 5265 Fabidae View MSA
124072229 5270 Rosid View MSA
123742665 5271 Pentapetalae View MSA
122789908 5272 Eudicot View MSA
122042687 5273 Angiosperm View MSA
121310001 5274 Embryophyte View MSA
123347609 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.17702 0.0 18.7592    
cufflinks 0.452973 0.0 1.72489    
cufflinks 10.3416 0.0 29.2372   High
cufflinks 0.603245 0.0 2.2668    
cufflinks 2.46765 0.0 8.46579    
cufflinks 0.642054 0.0 2.40903    
cufflinks 0.0924525 0.0 0.375026 Low Low
cufflinks 2.96028 0.0 9.89983    
cufflinks 4.01884 0.0 12.9397    
cufflinks 0.111       Low
cufflinks 2.422        
cufflinks 2.555        
cufflinks 0.053     Low Low
cufflinks 0.099       Low
cufflinks 0.311        
cufflinks 2.113        
cufflinks 1.12        
cufflinks 0.974        
cufflinks 0.395        
cufflinks 3.734        
cufflinks 2.229        
cufflinks 4.231        
cufflinks 1.836        
cufflinks 4.098        
cufflinks 3.808        
cufflinks 1.789        

0 Strain