Gene : Glyma.U038300 G. max Wm82.a2.v1
Defline:  (1 of 8) 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase Genomic Order:  7
Name:  ? Glyma.U038300 Secondary Identifier:  ? PAC:30541470
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2541 Glycine max pathologic  
Gmax PWY-5670 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U038300 0.5kb upstream 0.5kb upstream 5519 true scaffold_44: 61315-66833 Glycine max
Glyma.U038300 0.5kb upstream 0.5kb upstream 500 false scaffold_44: 61315-61814 Glycine max
Glyma.U038300 0.5kb downstream 0.5kb downstream 5519 true scaffold_44: 61815-67333 Glycine max
Glyma.U038300 0.5kb downstream 0.5kb downstream 500 false scaffold_44: 66834-67333 Glycine max
Glyma.U038300 1.0kb upstream 1.0kb upstream 6019 true scaffold_44: 60815-66833 Glycine max
Glyma.U038300 1.0kb upstream 1.0kb upstream 1000 false scaffold_44: 60815-61814 Glycine max
Glyma.U038300 1.0kb downstream 1.0kb downstream 6019 true scaffold_44: 61815-67833 Glycine max
Glyma.U038300 1.0kb downstream 1.0kb downstream 1000 false scaffold_44: 66834-67833 Glycine max
Glyma.U038300 2.0kb upstream 2.0kb upstream 7019 true scaffold_44: 59815-66833 Glycine max
Glyma.U038300 2.0kb upstream 2.0kb upstream 2000 false scaffold_44: 59815-61814 Glycine max
Glyma.U038300 2.0kb downstream 2.0kb downstream 7019 true scaffold_44: 61815-68833 Glycine max
Glyma.U038300 2.0kb downstream 2.0kb downstream 2000 false scaffold_44: 66834-68833 Glycine max
Glyma.U038300 5.0kb upstream 5.0kb upstream 10019 true scaffold_44: 56815-66833 Glycine max
Glyma.U038300 5.0kb upstream 5.0kb upstream 5000 false scaffold_44: 56815-61814 Glycine max
Glyma.U038300 5.0kb downstream 5.0kb downstream 10019 true scaffold_44: 61815-71833 Glycine max
Glyma.U038300 5.0kb downstream 5.0kb downstream 5000 false scaffold_44: 66834-71833 Glycine max
Glyma.U038300 10.0kb upstream 10.0kb upstream 15019 true scaffold_44: 51815-66833 Glycine max
Glyma.U038300 10.0kb upstream 10.0kb upstream 10000 false scaffold_44: 51815-61814 Glycine max
Glyma.U038300 10.0kb downstream 10.0kb downstream 15019 true scaffold_44: 61815-76833 Glycine max
Glyma.U038300 10.0kb downstream 10.0kb downstream 10000 false scaffold_44: 66834-76833 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306242 5265 Fabidae View MSA
124072398 5270 Rosid View MSA
123747368 5271 Pentapetalae View MSA
122788930 5272 Eudicot View MSA
122042003 5273 Angiosperm View MSA
121344187 5274 Embryophyte View MSA
123428498 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.06187 0.0 8.77558   Low
cufflinks 6.54791 0.0 23.7128    
cufflinks 12.3626 0.0 36.4403    
cufflinks 13.6068 0.0 46.1452    
cufflinks 32.279 0.0 103.191 High High
cufflinks 9.66115 0.0 33.1873    
cufflinks 11.9688 0.0 40.7351    
cufflinks 9.94665 0.0 34.0477    
cufflinks 33.5447 0.0 108.099 High High
cufflinks 7.146        
cufflinks 6.328     High  
cufflinks 2.37        
cufflinks 3.499        
cufflinks 5.833        
cufflinks 52.467     High High
cufflinks 1.82        
cufflinks 11.796     High High
cufflinks 2.127        
cufflinks 2.694        
cufflinks 1.161       Low
cufflinks 6.819     High  
cufflinks 1.184       Low
cufflinks 1.592        
cufflinks 3.392        
cufflinks 1.383       Low
cufflinks 8.253     High  

0 Strain