Gene : Glyma.U039100 G. max Wm82.a2.v1
Defline:  (1 of 46) PF00046//PF02183 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) Genomic Order:  15
Name:  ? Glyma.U039100 Secondary Identifier:  ? PAC:30541483
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U039100 0.5kb upstream 0.5kb upstream 3089 true scaffold_44: 149270-152358 Glycine max
Glyma.U039100 0.5kb upstream 0.5kb upstream 500 false scaffold_44: 149270-149769 Glycine max
Glyma.U039100 0.5kb downstream 0.5kb downstream 3089 true scaffold_44: 149770-152858 Glycine max
Glyma.U039100 0.5kb downstream 0.5kb downstream 500 false scaffold_44: 152359-152858 Glycine max
Glyma.U039100 1.0kb upstream 1.0kb upstream 3589 true scaffold_44: 148770-152358 Glycine max
Glyma.U039100 1.0kb upstream 1.0kb upstream 1000 false scaffold_44: 148770-149769 Glycine max
Glyma.U039100 1.0kb downstream 1.0kb downstream 3589 true scaffold_44: 149770-153358 Glycine max
Glyma.U039100 1.0kb downstream 1.0kb downstream 1000 false scaffold_44: 152359-153358 Glycine max
Glyma.U039100 2.0kb upstream 2.0kb upstream 4589 true scaffold_44: 147770-152358 Glycine max
Glyma.U039100 2.0kb upstream 2.0kb upstream 2000 false scaffold_44: 147770-149769 Glycine max
Glyma.U039100 2.0kb downstream 2.0kb downstream 4589 true scaffold_44: 149770-154358 Glycine max
Glyma.U039100 2.0kb downstream 2.0kb downstream 2000 false scaffold_44: 152359-154358 Glycine max
Glyma.U039100 5.0kb upstream 5.0kb upstream 7589 true scaffold_44: 144770-152358 Glycine max
Glyma.U039100 5.0kb upstream 5.0kb upstream 5000 false scaffold_44: 144770-149769 Glycine max
Glyma.U039100 5.0kb downstream 5.0kb downstream 7589 true scaffold_44: 149770-157358 Glycine max
Glyma.U039100 5.0kb downstream 5.0kb downstream 5000 false scaffold_44: 152359-157358 Glycine max
Glyma.U039100 10.0kb upstream 10.0kb upstream 12589 true scaffold_44: 139770-152358 Glycine max
Glyma.U039100 10.0kb upstream 10.0kb upstream 10000 false scaffold_44: 139770-149769 Glycine max
Glyma.U039100 10.0kb downstream 10.0kb downstream 12589 true scaffold_44: 149770-162358 Glycine max
Glyma.U039100 10.0kb downstream 10.0kb downstream 10000 false scaffold_44: 152359-162358 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304461 5265 Fabidae View MSA
124071964 5270 Rosid View MSA
123750745 5271 Pentapetalae View MSA
122796686 5272 Eudicot View MSA
122050134 5273 Angiosperm View MSA
121351534 5274 Embryophyte View MSA
123382211 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.350513 0.0 1.33856   Low
cufflinks 0.894154 0.0 3.2618    
cufflinks 4.83834 0.0 14.6822    
cufflinks 9.24513 0.0 25.9076    
cufflinks 5.48607 0.0 16.4643    
cufflinks 2.31822 0.0 7.83905    
cufflinks 0.123983 0.0 0.493502 Low Low
cufflinks 18.0705 0.0 48.457   High
cufflinks 15.4006 0.0 41.633   High
cufflinks 1.76        
cufflinks 33.062     High High
cufflinks 1.849        
cufflinks 0.804        
cufflinks 0.486        
cufflinks 14.91     High High
cufflinks 1.124        
cufflinks 0.674        
cufflinks 1.027        
cufflinks 0.506        
cufflinks 0.452        
cufflinks 10.433     High High
cufflinks 0.267       Low
cufflinks 0.2       Low
cufflinks 27.879     High High
cufflinks 0.947        
cufflinks 4.004        

0 Strain