Gene : Glyma.U040600 G. max Wm82.a2.v1
Defline:  (1 of 2) 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase Genomic Order:  1
Name:  ? Glyma.U040600 Secondary Identifier:  ? PAC:30487121
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5466 Glycine max pathologic  
Gmax PWY-6824 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U040600 0.5kb upstream 0.5kb upstream 3451 true scaffold_614: 3280-6730 Glycine max
Glyma.U040600 0.5kb upstream 0.5kb upstream 500 false scaffold_614: 3280-3779 Glycine max
Glyma.U040600 0.5kb downstream 0.5kb downstream 3451 true scaffold_614: 3780-7230 Glycine max
Glyma.U040600 0.5kb downstream 0.5kb downstream 500 false scaffold_614: 6731-7230 Glycine max
Glyma.U040600 1.0kb upstream 1.0kb upstream 3951 true scaffold_614: 2780-6730 Glycine max
Glyma.U040600 1.0kb upstream 1.0kb upstream 1000 false scaffold_614: 2780-3779 Glycine max
Glyma.U040600 1.0kb downstream 1.0kb downstream 3951 true scaffold_614: 3780-7730 Glycine max
Glyma.U040600 1.0kb downstream 1.0kb downstream 1000 false scaffold_614: 6731-7730 Glycine max
Glyma.U040600 2.0kb upstream 2.0kb upstream 4951 true scaffold_614: 1780-6730 Glycine max
Glyma.U040600 2.0kb upstream 2.0kb upstream 2000 false scaffold_614: 1780-3779 Glycine max
Glyma.U040600 2.0kb downstream 2.0kb downstream 4407 true scaffold_614: 3780-8186 Glycine max
Glyma.U040600 2.0kb downstream 2.0kb downstream 1456 false scaffold_614: 6731-8186 Glycine max
Glyma.U040600 5.0kb upstream 5.0kb upstream 6730 true scaffold_614: 1-6730 Glycine max
Glyma.U040600 5.0kb upstream 5.0kb upstream 3779 false scaffold_614: 1-3779 Glycine max
Glyma.U040600 5.0kb downstream 5.0kb downstream 4407 true scaffold_614: 3780-8186 Glycine max
Glyma.U040600 5.0kb downstream 5.0kb downstream 1456 false scaffold_614: 6731-8186 Glycine max
Glyma.U040600 10.0kb upstream 10.0kb upstream 6730 true scaffold_614: 1-6730 Glycine max
Glyma.U040600 10.0kb upstream 10.0kb upstream 3779 false scaffold_614: 1-3779 Glycine max
Glyma.U040600 10.0kb downstream 10.0kb downstream 4407 true scaffold_614: 3780-8186 Glycine max
Glyma.U040600 10.0kb downstream 10.0kb downstream 1456 false scaffold_614: 6731-8186 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305674 5265 Fabidae View MSA
124065870 5270 Rosid View MSA
123745907 5271 Pentapetalae View MSA
122793198 5272 Eudicot View MSA
122046121 5273 Angiosperm View MSA
121348734 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.4622 0.0 60.2744 High High
cufflinks 0.386935 0.0 1.4409    
cufflinks 1.82195 0.0 5.97226    
cufflinks 0.509339 0.0 1.86819    
cufflinks 8.15742 0.0 22.2655    
cufflinks 28.4554 0.0 77.2534 High High
cufflinks 0.0669662 0.0 0.267874 Low Low
cufflinks 0.516118 0.0 1.89122    
cufflinks 6.62755 0.0 18.3911    
cufflinks 7.267        
cufflinks 97.612     High High
cufflinks 4.66        
cufflinks 15.129     High  
cufflinks 7.756     High  
cufflinks 73.87     High High
cufflinks 1.264        
cufflinks 137.523     High High
cufflinks 1.068        
cufflinks 0.768       Low
cufflinks 0.704       Low
cufflinks 55.021     High  
cufflinks 0.938        
cufflinks 0.903       Low
cufflinks 83.129     High High
cufflinks 0.688       Low
cufflinks 63.328     High High

0 Strain