Gene : Glyma.U041400 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR11993 - NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT Genomic Order:  1
Name:  ? Glyma.U041400 Secondary Identifier:  ? PAC:30495647
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3781 Glycine max pathologic  
Gmax PWY-4302 Glycine max pathologic  
Gmax PWY-5083 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U041400 0.5kb upstream 0.5kb upstream 791 true scaffold_660: 1794-2584 Glycine max
Glyma.U041400 0.5kb upstream 0.5kb upstream 500 false scaffold_660: 2085-2584 Glycine max
Glyma.U041400 0.5kb downstream 0.5kb downstream 791 true scaffold_660: 1294-2084 Glycine max
Glyma.U041400 0.5kb downstream 0.5kb downstream 500 false scaffold_660: 1294-1793 Glycine max
Glyma.U041400 1.0kb upstream 1.0kb upstream 1291 true scaffold_660: 1794-3084 Glycine max
Glyma.U041400 1.0kb upstream 1.0kb upstream 1000 false scaffold_660: 2085-3084 Glycine max
Glyma.U041400 1.0kb downstream 1.0kb downstream 1291 true scaffold_660: 794-2084 Glycine max
Glyma.U041400 1.0kb downstream 1.0kb downstream 1000 false scaffold_660: 794-1793 Glycine max
Glyma.U041400 2.0kb upstream 2.0kb upstream 2291 true scaffold_660: 1794-4084 Glycine max
Glyma.U041400 2.0kb upstream 2.0kb upstream 2000 false scaffold_660: 2085-4084 Glycine max
Glyma.U041400 2.0kb downstream 2.0kb downstream 2084 true scaffold_660: 1-2084 Glycine max
Glyma.U041400 2.0kb downstream 2.0kb downstream 1793 false scaffold_660: 1-1793 Glycine max
Glyma.U041400 5.0kb upstream 5.0kb upstream 5291 true scaffold_660: 1794-7084 Glycine max
Glyma.U041400 5.0kb upstream 5.0kb upstream 5000 false scaffold_660: 2085-7084 Glycine max
Glyma.U041400 5.0kb downstream 5.0kb downstream 2084 true scaffold_660: 1-2084 Glycine max
Glyma.U041400 5.0kb downstream 5.0kb downstream 1793 false scaffold_660: 1-1793 Glycine max
Glyma.U041400 10.0kb upstream 10.0kb upstream 5884 true scaffold_660: 1794-7677 Glycine max
Glyma.U041400 10.0kb upstream 10.0kb upstream 5593 false scaffold_660: 2085-7677 Glycine max
Glyma.U041400 10.0kb downstream 10.0kb downstream 2084 true scaffold_660: 1-2084 Glycine max
Glyma.U041400 10.0kb downstream 10.0kb downstream 1793 false scaffold_660: 1-1793 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026692 5273 Angiosperm View MSA
122250313 5265 Fabidae View MSA
124070566 5270 Rosid View MSA
123750538 5271 Pentapetalae View MSA
122773711 5272 Eudicot View MSA
121350081 5274 Embryophyte View MSA
123381572 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.859519 0.0 3.48197    
cufflinks 0.267583 0.0 1.16966   Low
cufflinks 0.717645 0.0 2.91967    
cufflinks 6.05202 0.0 22.5582   High
cufflinks 0.524592 0.0 2.16817    
cufflinks 0.496851 0.0 2.07307    
cufflinks 1.38738 0.0 5.49882    
cufflinks 0.609517 0.0 2.49795    
cufflinks 1.00137 0.0 4.01334    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.064        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain