Gene : Glyma.U042300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR24078:SF298 - HEAT SHOCK PROTEIN 40-LIKE Genomic Order:  1
Name:  ? Glyma.U042300 Secondary Identifier:  ? PAC:30511175
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U042300 0.5kb upstream 0.5kb upstream 5446 true scaffold_73: 26773-32218 Glycine max
Glyma.U042300 0.5kb upstream 0.5kb upstream 500 false scaffold_73: 26773-27272 Glycine max
Glyma.U042300 0.5kb downstream 0.5kb downstream 5446 true scaffold_73: 27273-32718 Glycine max
Glyma.U042300 0.5kb downstream 0.5kb downstream 500 false scaffold_73: 32219-32718 Glycine max
Glyma.U042300 1.0kb upstream 1.0kb upstream 5946 true scaffold_73: 26273-32218 Glycine max
Glyma.U042300 1.0kb upstream 1.0kb upstream 1000 false scaffold_73: 26273-27272 Glycine max
Glyma.U042300 1.0kb downstream 1.0kb downstream 5946 true scaffold_73: 27273-33218 Glycine max
Glyma.U042300 1.0kb downstream 1.0kb downstream 1000 false scaffold_73: 32219-33218 Glycine max
Glyma.U042300 2.0kb upstream 2.0kb upstream 6946 true scaffold_73: 25273-32218 Glycine max
Glyma.U042300 2.0kb upstream 2.0kb upstream 2000 false scaffold_73: 25273-27272 Glycine max
Glyma.U042300 2.0kb downstream 2.0kb downstream 6946 true scaffold_73: 27273-34218 Glycine max
Glyma.U042300 2.0kb downstream 2.0kb downstream 2000 false scaffold_73: 32219-34218 Glycine max
Glyma.U042300 5.0kb upstream 5.0kb upstream 9946 true scaffold_73: 22273-32218 Glycine max
Glyma.U042300 5.0kb upstream 5.0kb upstream 5000 false scaffold_73: 22273-27272 Glycine max
Glyma.U042300 5.0kb downstream 5.0kb downstream 9946 true scaffold_73: 27273-37218 Glycine max
Glyma.U042300 5.0kb downstream 5.0kb downstream 5000 false scaffold_73: 32219-37218 Glycine max
Glyma.U042300 10.0kb upstream 10.0kb upstream 14946 true scaffold_73: 17273-32218 Glycine max
Glyma.U042300 10.0kb upstream 10.0kb upstream 10000 false scaffold_73: 17273-27272 Glycine max
Glyma.U042300 10.0kb downstream 10.0kb downstream 14946 true scaffold_73: 27273-42218 Glycine max
Glyma.U042300 10.0kb downstream 10.0kb downstream 10000 false scaffold_73: 32219-42218 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309230 5265 Fabidae View MSA
124067139 5270 Rosid View MSA
123747669 5271 Pentapetalae View MSA
122796849 5272 Eudicot View MSA
122043533 5273 Angiosperm View MSA
123429128 5275 Viridiplantae View MSA
121350390 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.58942 0.0 5.48763    
cufflinks 1.90404 0.0 6.46735    
cufflinks 2.39339 0.0 7.88477    
cufflinks 1.66424 0.0 5.71894    
cufflinks 2.01066 0.0 6.75814    
cufflinks 3.20474 0.0 10.1249   High
cufflinks 3.4428 0.0 10.7839   High
cufflinks 1.34975 0.0 4.73356   Low
cufflinks 2.35947 0.0 7.79191    
cufflinks 0.206        
cufflinks 0.007     Low Low
cufflinks 0.23        
cufflinks 0.683        
cufflinks 0.452        
cufflinks 0.004     Low Low
cufflinks 0.35        
cufflinks 0.271        
cufflinks 0.226        
cufflinks 0.563        
cufflinks 0.086     Low  
cufflinks 0.146        
cufflinks 0.25        
cufflinks 0.237        
cufflinks 0.629        
cufflinks 0.323        
cufflinks 0.417        

0 Strain