Gene : Sevir.5G468800 S. viridis v2.1
Defline:  (1 of 1) PTHR13483:SF3 - BOX C/D SNORNA PROTEIN 1 Genomic Order:  5070
Name:  ? Sevir.5G468800 Secondary Identifier:  ? PAC:40633272
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G468800 0.5kb upstream 0.5kb upstream 4132 true Chr_05: 46253660-46257791 Setaria viridis
Sevir.5G468800 0.5kb upstream 0.5kb upstream 500 false Chr_05: 46257292-46257791 Setaria viridis
Sevir.5G468800 0.5kb downstream 0.5kb downstream 4132 true Chr_05: 46253160-46257291 Setaria viridis
Sevir.5G468800 0.5kb downstream 0.5kb downstream 500 false Chr_05: 46253160-46253659 Setaria viridis
Sevir.5G468800 1.0kb upstream 1.0kb upstream 4632 true Chr_05: 46253660-46258291 Setaria viridis
Sevir.5G468800 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 46257292-46258291 Setaria viridis
Sevir.5G468800 1.0kb downstream 1.0kb downstream 4632 true Chr_05: 46252660-46257291 Setaria viridis
Sevir.5G468800 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 46252660-46253659 Setaria viridis
Sevir.5G468800 2.0kb upstream 2.0kb upstream 5632 true Chr_05: 46253660-46259291 Setaria viridis
Sevir.5G468800 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 46257292-46259291 Setaria viridis
Sevir.5G468800 2.0kb downstream 2.0kb downstream 5632 true Chr_05: 46251660-46257291 Setaria viridis
Sevir.5G468800 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 46251660-46253659 Setaria viridis
Sevir.5G468800 5.0kb upstream 5.0kb upstream 8632 true Chr_05: 46253660-46262291 Setaria viridis
Sevir.5G468800 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 46257292-46262291 Setaria viridis
Sevir.5G468800 5.0kb downstream 5.0kb downstream 8632 true Chr_05: 46248660-46257291 Setaria viridis
Sevir.5G468800 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 46248660-46253659 Setaria viridis
Sevir.5G468800 10.0kb upstream 10.0kb upstream 13632 true Chr_05: 46253660-46267291 Setaria viridis
Sevir.5G468800 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 46257292-46267291 Setaria viridis
Sevir.5G468800 10.0kb downstream 10.0kb downstream 13632 true Chr_05: 46243660-46257291 Setaria viridis
Sevir.5G468800 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 46243660-46253659 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195717 5267 Panicoideae View MSA
124570464 5269 Grass View MSA
122043413 5273 Angiosperm View MSA
121347000 5274 Embryophyte View MSA
123426353 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain