Gene : Sevir.5G345000 S. viridis v2.1
Defline:  (1 of 2) K04718 - sphingosine kinase (SPHK) Genomic Order:  3727
Name:  ? Sevir.5G345000 Secondary Identifier:  ? PAC:40629570
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5129 Setaria viridis pathologic  
Sviridis PWY-6483 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G345000 0.5kb upstream 0.5kb upstream 4818 true Chr_05: 38165157-38169974 Setaria viridis
Sevir.5G345000 0.5kb upstream 0.5kb upstream 500 false Chr_05: 38169475-38169974 Setaria viridis
Sevir.5G345000 0.5kb downstream 0.5kb downstream 4818 true Chr_05: 38164657-38169474 Setaria viridis
Sevir.5G345000 0.5kb downstream 0.5kb downstream 500 false Chr_05: 38164657-38165156 Setaria viridis
Sevir.5G345000 1.0kb upstream 1.0kb upstream 5318 true Chr_05: 38165157-38170474 Setaria viridis
Sevir.5G345000 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 38169475-38170474 Setaria viridis
Sevir.5G345000 1.0kb downstream 1.0kb downstream 5318 true Chr_05: 38164157-38169474 Setaria viridis
Sevir.5G345000 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 38164157-38165156 Setaria viridis
Sevir.5G345000 2.0kb upstream 2.0kb upstream 6318 true Chr_05: 38165157-38171474 Setaria viridis
Sevir.5G345000 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 38169475-38171474 Setaria viridis
Sevir.5G345000 2.0kb downstream 2.0kb downstream 6318 true Chr_05: 38163157-38169474 Setaria viridis
Sevir.5G345000 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 38163157-38165156 Setaria viridis
Sevir.5G345000 5.0kb upstream 5.0kb upstream 9318 true Chr_05: 38165157-38174474 Setaria viridis
Sevir.5G345000 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 38169475-38174474 Setaria viridis
Sevir.5G345000 5.0kb downstream 5.0kb downstream 9318 true Chr_05: 38160157-38169474 Setaria viridis
Sevir.5G345000 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 38160157-38165156 Setaria viridis
Sevir.5G345000 10.0kb upstream 10.0kb upstream 14318 true Chr_05: 38165157-38179474 Setaria viridis
Sevir.5G345000 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 38169475-38179474 Setaria viridis
Sevir.5G345000 10.0kb downstream 10.0kb downstream 14318 true Chr_05: 38155157-38169474 Setaria viridis
Sevir.5G345000 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 38155157-38165156 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176509 5267 Panicoideae View MSA
124568835 5269 Grass View MSA
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain