Gene : Sevir.5G323900 S. viridis v2.1
Defline:  (1 of 1) 2.4.1.182 - Lipid-A-disaccharide synthase Genomic Order:  3503
Name:  ? Sevir.5G323900 Secondary Identifier:  ? PAC:40632630
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis NAGLIPASYN-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G323900 0.5kb upstream 0.5kb upstream 7848 true Chr_05: 36547242-36555089 Setaria viridis
Sevir.5G323900 0.5kb upstream 0.5kb upstream 500 false Chr_05: 36554590-36555089 Setaria viridis
Sevir.5G323900 0.5kb downstream 0.5kb downstream 7848 true Chr_05: 36546742-36554589 Setaria viridis
Sevir.5G323900 0.5kb downstream 0.5kb downstream 500 false Chr_05: 36546742-36547241 Setaria viridis
Sevir.5G323900 1.0kb upstream 1.0kb upstream 8348 true Chr_05: 36547242-36555589 Setaria viridis
Sevir.5G323900 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 36554590-36555589 Setaria viridis
Sevir.5G323900 1.0kb downstream 1.0kb downstream 8348 true Chr_05: 36546242-36554589 Setaria viridis
Sevir.5G323900 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 36546242-36547241 Setaria viridis
Sevir.5G323900 2.0kb upstream 2.0kb upstream 9348 true Chr_05: 36547242-36556589 Setaria viridis
Sevir.5G323900 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 36554590-36556589 Setaria viridis
Sevir.5G323900 2.0kb downstream 2.0kb downstream 9348 true Chr_05: 36545242-36554589 Setaria viridis
Sevir.5G323900 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 36545242-36547241 Setaria viridis
Sevir.5G323900 5.0kb upstream 5.0kb upstream 12348 true Chr_05: 36547242-36559589 Setaria viridis
Sevir.5G323900 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 36554590-36559589 Setaria viridis
Sevir.5G323900 5.0kb downstream 5.0kb downstream 12348 true Chr_05: 36542242-36554589 Setaria viridis
Sevir.5G323900 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 36542242-36547241 Setaria viridis
Sevir.5G323900 10.0kb upstream 10.0kb upstream 17348 true Chr_05: 36547242-36564589 Setaria viridis
Sevir.5G323900 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 36554590-36564589 Setaria viridis
Sevir.5G323900 10.0kb downstream 10.0kb downstream 17348 true Chr_05: 36537242-36554589 Setaria viridis
Sevir.5G323900 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 36537242-36547241 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180013 5267 Panicoideae View MSA
124573921 5269 Grass View MSA
122042549 5273 Angiosperm View MSA
121345953 5274 Embryophyte View MSA
123380297 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain