Gene : Sevir.5G304600 S. viridis v2.1
Defline:  (1 of 1) PTHR10210//PTHR10210:SF45 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE // RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 3, CHLOROPLASTIC Genomic Order:  3295
Name:  ? Sevir.5G304600 Secondary Identifier:  ? PAC:40635954
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY0-662 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G304600 0.5kb upstream 0.5kb upstream 4058 true Chr_05: 35095039-35099096 Setaria viridis
Sevir.5G304600 0.5kb upstream 0.5kb upstream 500 false Chr_05: 35095039-35095538 Setaria viridis
Sevir.5G304600 0.5kb downstream 0.5kb downstream 4058 true Chr_05: 35095539-35099596 Setaria viridis
Sevir.5G304600 0.5kb downstream 0.5kb downstream 500 false Chr_05: 35099097-35099596 Setaria viridis
Sevir.5G304600 1.0kb upstream 1.0kb upstream 4558 true Chr_05: 35094539-35099096 Setaria viridis
Sevir.5G304600 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 35094539-35095538 Setaria viridis
Sevir.5G304600 1.0kb downstream 1.0kb downstream 4558 true Chr_05: 35095539-35100096 Setaria viridis
Sevir.5G304600 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 35099097-35100096 Setaria viridis
Sevir.5G304600 2.0kb upstream 2.0kb upstream 5558 true Chr_05: 35093539-35099096 Setaria viridis
Sevir.5G304600 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 35093539-35095538 Setaria viridis
Sevir.5G304600 2.0kb downstream 2.0kb downstream 5558 true Chr_05: 35095539-35101096 Setaria viridis
Sevir.5G304600 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 35099097-35101096 Setaria viridis
Sevir.5G304600 5.0kb upstream 5.0kb upstream 8558 true Chr_05: 35090539-35099096 Setaria viridis
Sevir.5G304600 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 35090539-35095538 Setaria viridis
Sevir.5G304600 5.0kb downstream 5.0kb downstream 8558 true Chr_05: 35095539-35104096 Setaria viridis
Sevir.5G304600 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 35099097-35104096 Setaria viridis
Sevir.5G304600 10.0kb upstream 10.0kb upstream 13558 true Chr_05: 35085539-35099096 Setaria viridis
Sevir.5G304600 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 35085539-35095538 Setaria viridis
Sevir.5G304600 10.0kb downstream 10.0kb downstream 13558 true Chr_05: 35095539-35109096 Setaria viridis
Sevir.5G304600 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 35099097-35109096 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185893 5267 Panicoideae View MSA
124584463 5269 Grass View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain