Gene : Sevir.5G302700 S. viridis v2.1
Defline:  (1 of 2) PTHR23416//PTHR23416:SF67 - SIALIC ACID SYNTHASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3274
Name:  ? Sevir.5G302700 Secondary Identifier:  ? PAC:40629448
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis CYSTSYN-PWY Setaria viridis pathologic  
Sviridis PWY-6936 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G302700 0.5kb upstream 0.5kb upstream 1795 true Chr_05: 34976129-34977923 Setaria viridis
Sevir.5G302700 0.5kb upstream 0.5kb upstream 500 false Chr_05: 34976129-34976628 Setaria viridis
Sevir.5G302700 0.5kb downstream 0.5kb downstream 1795 true Chr_05: 34976629-34978423 Setaria viridis
Sevir.5G302700 0.5kb downstream 0.5kb downstream 500 false Chr_05: 34977924-34978423 Setaria viridis
Sevir.5G302700 1.0kb upstream 1.0kb upstream 2295 true Chr_05: 34975629-34977923 Setaria viridis
Sevir.5G302700 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 34975629-34976628 Setaria viridis
Sevir.5G302700 1.0kb downstream 1.0kb downstream 2295 true Chr_05: 34976629-34978923 Setaria viridis
Sevir.5G302700 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 34977924-34978923 Setaria viridis
Sevir.5G302700 2.0kb upstream 2.0kb upstream 3295 true Chr_05: 34974629-34977923 Setaria viridis
Sevir.5G302700 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 34974629-34976628 Setaria viridis
Sevir.5G302700 2.0kb downstream 2.0kb downstream 3295 true Chr_05: 34976629-34979923 Setaria viridis
Sevir.5G302700 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 34977924-34979923 Setaria viridis
Sevir.5G302700 5.0kb upstream 5.0kb upstream 6295 true Chr_05: 34971629-34977923 Setaria viridis
Sevir.5G302700 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 34971629-34976628 Setaria viridis
Sevir.5G302700 5.0kb downstream 5.0kb downstream 6295 true Chr_05: 34976629-34982923 Setaria viridis
Sevir.5G302700 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 34977924-34982923 Setaria viridis
Sevir.5G302700 10.0kb upstream 10.0kb upstream 11295 true Chr_05: 34966629-34977923 Setaria viridis
Sevir.5G302700 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 34966629-34976628 Setaria viridis
Sevir.5G302700 10.0kb downstream 10.0kb downstream 11295 true Chr_05: 34976629-34987923 Setaria viridis
Sevir.5G302700 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 34977924-34987923 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178876 5267 Panicoideae View MSA
124579116 5269 Grass View MSA
122047158 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain