Gene : Sevir.5G400000 S. viridis v2.1

Defline:  (1 of 1) K02320 - DNA polymerase alpha subunit A (POLA1) Genomic Order:  4322
Name:  ? Sevir.5G400000 Secondary Identifier:  ? PAC:40635643

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G400000 0.5kb upstream 0.5kb upstream 11967 true Chr_05: 41815729-41827695 Setaria viridis
Sevir.5G400000 0.5kb upstream 0.5kb upstream 500 false Chr_05: 41827196-41827695 Setaria viridis
Sevir.5G400000 0.5kb downstream 0.5kb downstream 11967 true Chr_05: 41815229-41827195 Setaria viridis
Sevir.5G400000 0.5kb downstream 0.5kb downstream 500 false Chr_05: 41815229-41815728 Setaria viridis
Sevir.5G400000 1.0kb upstream 1.0kb upstream 12467 true Chr_05: 41815729-41828195 Setaria viridis
Sevir.5G400000 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 41827196-41828195 Setaria viridis
Sevir.5G400000 1.0kb downstream 1.0kb downstream 12467 true Chr_05: 41814729-41827195 Setaria viridis
Sevir.5G400000 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 41814729-41815728 Setaria viridis
Sevir.5G400000 2.0kb upstream 2.0kb upstream 13467 true Chr_05: 41815729-41829195 Setaria viridis
Sevir.5G400000 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 41827196-41829195 Setaria viridis
Sevir.5G400000 2.0kb downstream 2.0kb downstream 13467 true Chr_05: 41813729-41827195 Setaria viridis
Sevir.5G400000 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 41813729-41815728 Setaria viridis
Sevir.5G400000 5.0kb upstream 5.0kb upstream 16467 true Chr_05: 41815729-41832195 Setaria viridis
Sevir.5G400000 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 41827196-41832195 Setaria viridis
Sevir.5G400000 5.0kb downstream 5.0kb downstream 16467 true Chr_05: 41810729-41827195 Setaria viridis
Sevir.5G400000 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 41810729-41815728 Setaria viridis
Sevir.5G400000 10.0kb upstream 10.0kb upstream 21467 true Chr_05: 41815729-41837195 Setaria viridis
Sevir.5G400000 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 41827196-41837195 Setaria viridis
Sevir.5G400000 10.0kb downstream 10.0kb downstream 21467 true Chr_05: 41805729-41827195 Setaria viridis
Sevir.5G400000 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 41805729-41815728 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194895 5267 Panicoideae View MSA
124575248 5269 Grass View MSA
122042985 5273 Angiosperm View MSA
121344859 5274 Embryophyte View MSA
123423980 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain