Gene : Sevir.5G410800 S. viridis v2.1
Defline:  (1 of 2) PTHR23315//PTHR23315:SF117 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // SUBFAMILY NOT NAMED Genomic Order:  4433
Name:  ? Sevir.5G410800 Secondary Identifier:  ? PAC:40630114
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7511 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G410800 0.5kb upstream 0.5kb upstream 5486 true Chr_05: 42661608-42667093 Setaria viridis
Sevir.5G410800 0.5kb upstream 0.5kb upstream 500 false Chr_05: 42661608-42662107 Setaria viridis
Sevir.5G410800 0.5kb downstream 0.5kb downstream 5486 true Chr_05: 42662108-42667593 Setaria viridis
Sevir.5G410800 0.5kb downstream 0.5kb downstream 500 false Chr_05: 42667094-42667593 Setaria viridis
Sevir.5G410800 1.0kb upstream 1.0kb upstream 5986 true Chr_05: 42661108-42667093 Setaria viridis
Sevir.5G410800 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 42661108-42662107 Setaria viridis
Sevir.5G410800 1.0kb downstream 1.0kb downstream 5986 true Chr_05: 42662108-42668093 Setaria viridis
Sevir.5G410800 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 42667094-42668093 Setaria viridis
Sevir.5G410800 2.0kb upstream 2.0kb upstream 6986 true Chr_05: 42660108-42667093 Setaria viridis
Sevir.5G410800 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 42660108-42662107 Setaria viridis
Sevir.5G410800 2.0kb downstream 2.0kb downstream 6986 true Chr_05: 42662108-42669093 Setaria viridis
Sevir.5G410800 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 42667094-42669093 Setaria viridis
Sevir.5G410800 5.0kb upstream 5.0kb upstream 9986 true Chr_05: 42657108-42667093 Setaria viridis
Sevir.5G410800 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 42657108-42662107 Setaria viridis
Sevir.5G410800 5.0kb downstream 5.0kb downstream 9986 true Chr_05: 42662108-42672093 Setaria viridis
Sevir.5G410800 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 42667094-42672093 Setaria viridis
Sevir.5G410800 10.0kb upstream 10.0kb upstream 14986 true Chr_05: 42652108-42667093 Setaria viridis
Sevir.5G410800 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 42652108-42662107 Setaria viridis
Sevir.5G410800 10.0kb downstream 10.0kb downstream 14986 true Chr_05: 42662108-42677093 Setaria viridis
Sevir.5G410800 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 42667094-42677093 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176885 5267 Panicoideae View MSA
124572302 5269 Grass View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain