Gene : Sevir.5G316800 S. viridis v2.1
Defline:  (1 of 17) K01051 - pectinesterase (E3.1.1.11) Genomic Order:  3424
Name:  ? Sevir.5G316800 Secondary Identifier:  ? PAC:40631229
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-1081 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G316800 0.5kb upstream 0.5kb upstream 3574 true Chr_05: 36060009-36063582 Setaria viridis
Sevir.5G316800 0.5kb upstream 0.5kb upstream 500 false Chr_05: 36063083-36063582 Setaria viridis
Sevir.5G316800 0.5kb downstream 0.5kb downstream 3574 true Chr_05: 36059509-36063082 Setaria viridis
Sevir.5G316800 0.5kb downstream 0.5kb downstream 500 false Chr_05: 36059509-36060008 Setaria viridis
Sevir.5G316800 1.0kb upstream 1.0kb upstream 4074 true Chr_05: 36060009-36064082 Setaria viridis
Sevir.5G316800 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 36063083-36064082 Setaria viridis
Sevir.5G316800 1.0kb downstream 1.0kb downstream 4074 true Chr_05: 36059009-36063082 Setaria viridis
Sevir.5G316800 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 36059009-36060008 Setaria viridis
Sevir.5G316800 2.0kb upstream 2.0kb upstream 5074 true Chr_05: 36060009-36065082 Setaria viridis
Sevir.5G316800 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 36063083-36065082 Setaria viridis
Sevir.5G316800 2.0kb downstream 2.0kb downstream 5074 true Chr_05: 36058009-36063082 Setaria viridis
Sevir.5G316800 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 36058009-36060008 Setaria viridis
Sevir.5G316800 5.0kb upstream 5.0kb upstream 8074 true Chr_05: 36060009-36068082 Setaria viridis
Sevir.5G316800 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 36063083-36068082 Setaria viridis
Sevir.5G316800 5.0kb downstream 5.0kb downstream 8074 true Chr_05: 36055009-36063082 Setaria viridis
Sevir.5G316800 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 36055009-36060008 Setaria viridis
Sevir.5G316800 10.0kb upstream 10.0kb upstream 13074 true Chr_05: 36060009-36073082 Setaria viridis
Sevir.5G316800 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 36063083-36073082 Setaria viridis
Sevir.5G316800 10.0kb downstream 10.0kb downstream 13074 true Chr_05: 36050009-36063082 Setaria viridis
Sevir.5G316800 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 36050009-36060008 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199126 5267 Panicoideae View MSA
124579369 5269 Grass View MSA
122041979 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain